| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1335 |
|---|
| Symbol | |
|---|
| ID | 7308087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1417841 |
|---|
| End bp | 1419409 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643599077 |
|---|
| Product | peptidase C14 caspase catalytic subunit p20 |
|---|
| Protein accession | YP_002496638 |
|---|
| Protein GI | 220921337 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.479436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCGT TGTGGATTGT CGGCATCGTG CTCGCGTTCA GCGCGTGCCT GGCGATTCAA
CCTGTCTTCG CCCAAAGCAA AGCGGGCGAC CGAATCGCTC TGGTGATCGG CAACGCGCAA
TATCCGGACA GTGATACGGC GCTGACCACG CCGGTGCCCG ATGCACGGGC CCTCGCGACG
GCCCTGCAGC AGAAGGGCTA CACCGTCGAC GTCAACGAGA ACATGGCCAA GCTGGCCATG
CAGGCTGCCC TTGCGCGCCT CTACGACAAG ATCAAGTCCG GATCGACCGT TCTGTTCTAC
TTCAGCGGCT ATGGAATTCA ATCGAACAAG CAGAATTACC TGATTCCGGT CGATGCCCAG
ATCTGGACCG AGCCGGATCT GCGTCGCGAC GGCTTCAACG TCGAGACGAT CATCGGCGAA
ATCCAGAAGC GCGGGGCGGA TCTCAAGGTC GTGATTCTCG ATGCGGCCAA CCGCAACCCG
TTCGAGCGGC GCTTCCGCAG CTTCGCGAAC GGTCTCGCGC CGGTCGCCGA GGCGCCGCCG
AACACGCTGG TCTTCTACTC GACCCAGCCC GGGCAGATGC TGCGGCAGGT CTCGACCGCG
AAGAGCGCCT TCGCGGAGGA GCTGGTGCGG CAGATCGGCA GCACCGATGC GCTGACCCGG
ACCGTCTTCG ACAGGGCCCG CTCGGCCGTC TCGACGGCGA CGCAGGGCGC GCAGCTCCCG
TGGCTGTTCT CGACCCTGAA GGACAGCCCG GCCCCGAAGG ACAGCCCCAC GGCTTGGGTC
GATCCCGGGC CGGCGAAGAA GACCCCCGAG AAGGAGGCGC GGATCATCGA GATCCCGGGG
CCGGGCCCGG GACCGACCCC GGCCGGCCGG CCGGAGCCGT CGCCCGATCC GGCCGGCGAG
TTCAGCACGG CCCGGCGCGC CGGGACGAAG GAGGCGTTCG AGCGCTTCCT GGGCAGGTTC
CCGGACGGCG CCTGGGCCGA GCGCGCCCGG GCGGAGATCG CCCGGCTGGA CGAGCACGCC
AAGCCCGCCC CGGCGCCGAA GGTCCCGCAG CCGCCGCTCC CCTACAATCG CGAGGAGGAG
CGGCTGAAGG CCGAGCTGAA CAAGGCGCTG GAGCGCAACC CGGCCGATGG GGCCGCCCTC
TACCGGCGCG GGCAGCTCTA CGCGATCCAC CGCGAGTACA CGCTGGCGCT CGCGGATTTC
GACGAGGTCA TCCGTCTCAA CCCGCAGGAT GTCGAGGCGC TCAACAACCG CTGCTGGGTG
CGTGCGATGA TCGACGAGCT CGACCGGGCC CTGCGTGATT GCAACGAGGC TCTGAAGCTG
AGACCCAATT TCCCCGACGC GCTCGACAGT CGTGGACTGG TCAACCTCAA GATCGGGCTT
CCCGGTCTCG CCATCCGCGA TTACGATGCT GCCCTGAAGG GCAATGGAAA GCAGGCGTCG
TCTCTGTATG GACGCGGGAT GGCGCGGGTG CGGACGGGTG AGACGGAGGA AGGCAAGAGC
GACATCAACG ATGCGCTCCG GATGGATCCG GGCCTCGAGA AGGAGTTCGC TCAATACGGG
ATCCGTTGA
|
|---|
| Protein sequence | MRALWIVGIV LAFSACLAIQ PVFAQSKAGD RIALVIGNAQ YPDSDTALTT PVPDARALAT
ALQQKGYTVD VNENMAKLAM QAALARLYDK IKSGSTVLFY FSGYGIQSNK QNYLIPVDAQ
IWTEPDLRRD GFNVETIIGE IQKRGADLKV VILDAANRNP FERRFRSFAN GLAPVAEAPP
NTLVFYSTQP GQMLRQVSTA KSAFAEELVR QIGSTDALTR TVFDRARSAV STATQGAQLP
WLFSTLKDSP APKDSPTAWV DPGPAKKTPE KEARIIEIPG PGPGPTPAGR PEPSPDPAGE
FSTARRAGTK EAFERFLGRF PDGAWAERAR AEIARLDEHA KPAPAPKVPQ PPLPYNREEE
RLKAELNKAL ERNPADGAAL YRRGQLYAIH REYTLALADF DEVIRLNPQD VEALNNRCWV
RAMIDELDRA LRDCNEALKL RPNFPDALDS RGLVNLKIGL PGLAIRDYDA ALKGNGKQAS
SLYGRGMARV RTGETEEGKS DINDALRMDP GLEKEFAQYG IR
|
|---|
| |