Gene Mnod_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1109 
Symbol 
ID7304421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1176349 
End bp1177476 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content73% 
IMG OID643598857 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002496419 
Protein GI220921118 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGGG ATGCGATCGG ATCCGAGGCC ATCCGCGACG CCCTTGCCGA GTTGCTCCAG 
CAGCCCCCGC TCAGGAAGTC GCCGCAGCTG TCGGCCTTCC TCTCTTACGT GGTCGGGGAG
AGCCTCGCGG GTCGCGGCAG CCTGCTGAAA TCCTACACGA TCGCCACCGA CGCGCTGGGC
CGCGCGCCGA ACTTCGATCC GGCCACCGAT GCCATCGTGC GGGTCGAGGC GCGCCGCCTG
CGGCAGGTTC TCCAGCAGAT CTACGAGGAT CCCGCCTGCC CGCTCACCGT GCGCATCGAC
CTGCCGCTCG GGCGCTACGA ACCGACCTTC ACGCAGATCG CATCGGCCGC CGCGCATCGT
CCCGCCCTCG ACCCGGCGGC GAGCCTGCGC GAGAGCGAGC AGCGTTACCG GGCCCTCGTC
CAGGCGAGTG CGGCGATCGA GTGGCGGGCG AGCCCGGATG GGCAACTCGT CCAGAGCGCC
GGCTGGACTG CCCGCACCGG CAAGCCCGAT GCGGCGATCG GCGACGGCGG CTGGCTCGAT
GCCCTCCATC CCGACGACCG CGAGCGCGCC GCCGCGGCCT GGGCGGAGGC CCGCCGCTCC
GGCGAGCCGC TGGAGATCGC CTACCGTGTC CGCCATCGCG GGGGCGGCTA CCGCTGGATG
CTCGCCCGTG GCCTGCCCCT CGAGAACCTC GACGGGAGCA TCCGGGAATG GGTCGGCATC
CTGTCGGACA TCCACGAGCA GGTGATGGCG CAGGAGGCTC TGCGCTCCCG CGACGAAGCC
TTGAGCCTCG CGGTGGCGGC AGCCGGGCTC GCGGTCTTCG AGATCGATCC CGCGACCCGG
ATCGTGCGCT GGTCGGAGGG CGCCTCCGAC CTGATCGGAG CGGTCGACGG GCCGCTCGAA
GCCTGGACCC GGCGCATCGA TCCGGCGCAT GCGCCGCAGG TGATCGACGC GCTGGAGCAG
GCGCTGCGGG GCGAGGGCGG CTTCGATCTC GTCTATCGGG TCACCGATGC GGCCGGGCTC
CAGTGCTGGA TCGCCTGCCG CGGAAACCGC CTGCGCACCG CCCGCGGCGA GGCTCGCGTC
TTCGGGGTGG CCATCGACGT CACCGGCCGC TACGTGGGCC CGCCTTGA
 
Protein sequence
MERDAIGSEA IRDALAELLQ QPPLRKSPQL SAFLSYVVGE SLAGRGSLLK SYTIATDALG 
RAPNFDPATD AIVRVEARRL RQVLQQIYED PACPLTVRID LPLGRYEPTF TQIASAAAHR
PALDPAASLR ESEQRYRALV QASAAIEWRA SPDGQLVQSA GWTARTGKPD AAIGDGGWLD
ALHPDDRERA AAAWAEARRS GEPLEIAYRV RHRGGGYRWM LARGLPLENL DGSIREWVGI
LSDIHEQVMA QEALRSRDEA LSLAVAAAGL AVFEIDPATR IVRWSEGASD LIGAVDGPLE
AWTRRIDPAH APQVIDALEQ ALRGEGGFDL VYRVTDAAGL QCWIACRGNR LRTARGEARV
FGVAIDVTGR YVGPP