Gene Mnod_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0428 
Symbol 
ID7302164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp478936 
End bp481767 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content72% 
IMG OID643598207 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002495773 
Protein GI220920472 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.94781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACA TCGCGACAGC ACCAGGGGCG ACCGCCAGCA GGCCCGGCTT CGCCGTCGGC 
GAGGCCGGGC GCCTCGCGGC CCTGCGCAGC TATGCCATCC TCGACACACC GCGCGAGGCC
GAGTTCGACG ACATCGCCCA GATGGCGGCC CAGGCCTGCG GGACGCCGAT GGCGCATATC
AATTTCATCG ATGCGCACCG GCAGTGGATC AAGGCCGCGG TCGGGCACGA CATGCGGGAG
ATGCCTCTCG AATTCGGCTT CTGCACGGAG CTGCTCGGCT CGCCGGACAT CCTCCTCCTG
TCCGGTCTCG ACGCCGATCC GGGCCGCTCC GGGAACGTGC TCGTCGCGGG CGCCCCGCAC
CTGCGCTTCT ATGCCGGCGT GCCCCTGGTC ACGCCGGACG GATACGCCAT CGGGACGCTC
TGCGTCCTCG ACCGCGTGCC CCGGACCTTG ACCGAGCCGC AGCGTTTCAT CCTCAAGGCC
CTGGCCCGGA CCGTGATGGC GCAGCTCGAG ATGCGCCGGA CGGACGCAGC CCTGCGCGCC
AGCGAGGAGC GCTACCGCTC CCTCTTCAAC TCGATCGATG CCGGGTTCTG CGTCGTCGAG
ATGGAGTTCG ACGCGGCGGG CCGGGCCGCC GATTGCCGGT TCCTCGAGGT CAATCCGGCC
TTCGAAGCCC AGACGGGCCT CGTGGGCGCG GTGGGTAGGC GGCTGCGTGA CCTCGACCCG
GACCACGACC AGCCCTGGTT CGACATCTCC GGGCAGGTGG CGCTGACGGG GCGGCCGGTG
CGCTTCGAGA ATGCCGCGCC GGCGCTCAAG CGATGGTACG ACGTCCATGC CTACCGGGTG
GACGACCCGG CCCGGCATCG CGTCGCCATC CTGTTCAACG ACATCACGCG GCGGCGCGAG
AACGAGATGG CGCTGCTCGA GCGCGAGGCC GAATCGCGGC TCGTGGCGGA TGCGATGCCG
GCGCTGATCG CCGCGATCGA CCGGAGCTTC ACCTACCGGT TCGTGAACGC CGCCTACGAG
ACGTGGTTCG GGCATCCGCG CGAGGCCGTT CTGGGCCGGA CCATGAGCGA GCTGATCGGG
CCGGCGGAGT TCGCCTTCCG CCGTCCCTAT GTGGAGCGGG CGCTCGCCGG GGAGGAGGTG
CGGCTCGAAC GGAACTGGCC CTGGCCCGAC GGCCGTCCGC GCGTCGCCGA TATCCGCTAC
CTGCCGCGCC GCACGCCCGA GGGCTCGATC GACGGCGTCT ACGTCTTCGT TCACGACGTC
ACCGATCGCA AGCGCGTCGA GGATTTCCTG GAGGCAAAGG CCCAGTCCCT GGAGGCGCAG
ATCGCCGCCC AGGCCCGCGA CCGCGACCGC ATCTGGACCC TGTCGCCGGT GCTCAAGGTC
GTGGCGACGG CGCGGGGCGA GGTCCTGTCG GTGAACCCCT CCTGGGTCCG CACCCTCGGC
TGGTCGGAGG CCGAGAGCCT CGGGCGCTCC CTCCTCGACT TCGTGGCCCC GGAGGACCGC
GACGTGATGA CGGGCGAGCT GGAGCGGCGC CTGTCCGGCG TGCCGGGCGG CGACATCGAG
GTCGCGTTCC TCACCCAGAC CGGCGAGCCG CGGCGCATCC TGTGGACCAT CGTGCCGGAG
GAGGGGACGC TCTACGGCTT CGGCCGCGAC GTCTCCGAAC AGCGGCGGGC CGAGGAGGCG
CTTCGGCAGT CGCAGAAGCT CGAAGCGGTG GGCCAGCTCA CCGGGGGCGT GGCGCACGAC
TTCAACAACC TGCTCACCAT CATCCGCTCG TCGGTCGATT TCCTGCGCCG GCCCGACCTG
CCCGAGGAGC GCCGGCGGCG CTATCTCGAT GCGGTCTCCG ACACGGTCGA CCGCGCGGCC
AAGCTCACCG GCCAGCTCCT CGCCTTCGCC CGCCGCCAGG CGCTCAAGCT CGAGGTCATC
GACGTCGGGG TGCGGCTGCA GGCCGTGGCG GAGATGCTCG ATGCGGTGAC GGGCGCGCGC
ATCCGGGTGG TCACGCAAGT TCCGGACCGG CCCTGCTTCG TGCGCACGGA CTTGAGCCAG
TTCGAGACCG CGCTGGTGAA CATAGCGGTC AATGCGCGCG ATGCGATGAA CGGCGAGGGC
ACGCTGACGC TGCGGCTTGC GTGCGGCTGC GCGCTGCCGG CCATCCGCGG CCATGCGGGG
GCGCCCGGCC CCTTCGCGGC GGTGTCGCTG ACCGATACCG GCGCCGGCAT CCCGCCGGAC
CTGATCGGGC GCATCTTCGA GCCGTTCTTC ACCACCAAGG AGGTCGGCCG CGGCACCGGG
CTCGGCCTGT CCCAGGTCTT CGGCTTCGCC AAGCAGTCGG GCGGCGACAT CGCGGTCGAG
AGCACCCCCG GCCAGGGCAC GACCTTCACG CTCTACCTGC CGCAGGTCGA GATGGCGGAT
GGGCTCGCGG GGGGCGATCC GGATGCCCGC TCCCTGTCCC CGGCGGGCAA TGGCCGCCGG
GTGCTGGTGG TGGAGGACAA TGTCGAGGTC GGCCGCTTCG CCTGCCAGAT CCTGCAGGAT
CTCGGCTTTA CGCCGGAATG GGCGTCGAAT GCCGAGGAGG CGCTCGAACG GCTGGAGCCC
GACGGAGCGG GTTTCGACGC GGTGTTCTCG GACGTGGTGA TGCCCGGCAT GGGCGGCATC
GCGCTCGCCC GCGAGCTCCG CCGCCGGCTG CCGTGCCTGC CGGTGGTGCT GGCCTCCGGC
TACAGCCACG TGCTGGCGCA GGAGGGCGCG CACGGGTTCG AACTGCTGCA CAAGCCCTAT
TCCGGGGAGG AGCTGGGCCG CCTCCTGCAC CGCGTGACCG CGCGGGCCCC CGCCGCGCCG
CACGGCGGAT AG
 
Protein sequence
MTHIATAPGA TASRPGFAVG EAGRLAALRS YAILDTPREA EFDDIAQMAA QACGTPMAHI 
NFIDAHRQWI KAAVGHDMRE MPLEFGFCTE LLGSPDILLL SGLDADPGRS GNVLVAGAPH
LRFYAGVPLV TPDGYAIGTL CVLDRVPRTL TEPQRFILKA LARTVMAQLE MRRTDAALRA
SEERYRSLFN SIDAGFCVVE MEFDAAGRAA DCRFLEVNPA FEAQTGLVGA VGRRLRDLDP
DHDQPWFDIS GQVALTGRPV RFENAAPALK RWYDVHAYRV DDPARHRVAI LFNDITRRRE
NEMALLEREA ESRLVADAMP ALIAAIDRSF TYRFVNAAYE TWFGHPREAV LGRTMSELIG
PAEFAFRRPY VERALAGEEV RLERNWPWPD GRPRVADIRY LPRRTPEGSI DGVYVFVHDV
TDRKRVEDFL EAKAQSLEAQ IAAQARDRDR IWTLSPVLKV VATARGEVLS VNPSWVRTLG
WSEAESLGRS LLDFVAPEDR DVMTGELERR LSGVPGGDIE VAFLTQTGEP RRILWTIVPE
EGTLYGFGRD VSEQRRAEEA LRQSQKLEAV GQLTGGVAHD FNNLLTIIRS SVDFLRRPDL
PEERRRRYLD AVSDTVDRAA KLTGQLLAFA RRQALKLEVI DVGVRLQAVA EMLDAVTGAR
IRVVTQVPDR PCFVRTDLSQ FETALVNIAV NARDAMNGEG TLTLRLACGC ALPAIRGHAG
APGPFAAVSL TDTGAGIPPD LIGRIFEPFF TTKEVGRGTG LGLSQVFGFA KQSGGDIAVE
STPGQGTTFT LYLPQVEMAD GLAGGDPDAR SLSPAGNGRR VLVVEDNVEV GRFACQILQD
LGFTPEWASN AEEALERLEP DGAGFDAVFS DVVMPGMGGI ALARELRRRL PCLPVVLASG
YSHVLAQEGA HGFELLHKPY SGEELGRLLH RVTARAPAAP HGG