| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0270 |
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| Symbol | |
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| ID | 7308181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 300357 |
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| End bp | 303236 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643598051 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC-like protein |
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| Protein accession | YP_002495617 |
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| Protein GI | 220920316 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0511336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCCACG CCTCCCTTGC CCTCGCCCTC CTCGTCGCCC TCGCGGGGGC GCTCCTGCCG
TCCGCGGCGC GCGCGCTGGA GGCGGTGCGG GTCGGGCTCG ACGCCCAGGC GATCGACCTC
ACGCCCGCCA TCGAGCGCTA CCGCTCCGAC GGCGACCTGA TCCAGATCTC GACGGCGCCC
GGCAAGGACG GCATCGTCCG GCGCATCGCC GTGAAGGCGC GCGAGACCGG GGCGCGGCCG
GACTGGATCG TCTTCGCGCT CACCAACGAC ACCGACGAGC AGATCGACCG GCTTCTCGTC
GCGCCGCATT TCCGTCTCGT CGGCTCGGGC ATCATCTGGC CGGATCTCGG CGGCTCGCGC
ATCGCGGCGA TCACCGCGAG CCAGGGCATC CGGCCCGAGC GCGACGAGAG CCCGGATGCG
GACCAGTTCA CCGTCACGCT CGATCCCGGC ACGACCGTCA CCTTCGTGGC GGAGCTGCGC
ACCCCCAACG TGCCGCAGCT CTACCTCTGG GACCAGGACG CCTACCGCAA GAAGGCAACC
GGGCTCACCC TCTACAAGGG CATCATCATC GGCATCGCGG GGCTCCTCGC GCTCTTCCTC
ACCGTCGTGT TCGTGGTGAA GGGCGCGATC ATCTTTCCCG CCGCGGCGGC GCTGGCCTGG
TCGGTGCTGG CCTATACCTG CATCGATTTC GGCTTCTTCC AGCGGATCTT CCCGGTCACG
GAGGCGGCCG AGCGGGTCTA CCGCGCCTCC GCGGAGGCGG TGCTCGGCGC GACGCTGCTC
GTCTTCCTGT TCGCCTACCT CAACCTCGCC CGCTGGCACG TGCGCTACAG CCACGTGGCG
CTCCTGTGGC TGATCTTCCT CGCGGGCCTC GTGGCACTCG CCGTCGTCGA CCCGCCGGTG
GCGGCGGGCG TGGCGCGCAT CTCGATCGCG ACCGTGGCGG GCGTCGGCCT CCTCCTCGTC
GTGTATCTGG CAGCCCATAA CGGCTACGAC CGGGCGATCC TGCTGATCCC GACCTGGCTT
CTCCTGACCG CCTGGGTGGT GGCGGCGGGT TTCGCGATCA CCGGGCAGCT GCGCAACGAC
CTCGTCCAGC CGGCGCTGAT CGGCGGCCTC GTGCTCATCG TGATGCTGAT CGGCTTCACG
GTGCTCCAGC ATGCCTTCGC GGGCGGGGGC ATCGGCACGG CCGTGGTCTC GGACACCGAG
CGGCGGGCGC TGGCGCTGAC GGGTGCGGGC GACGTGGTGT TCGACTGGGA CGTGCCCGGC
GACCGGGTCT TCGCCGGTCC GGAGATCGAG AGCCAGCTCG GCCTCAAGCG CGGCGCCCTC
GAAGGACCGG CCGCGAACTG GCTGGCGCTG CTCCACCCCT TCGACGTCGA CCGCTACTCG
GCGGCCCTCG ACACGGTGAT CGAGGAGCGC CGCGGGCGCA TCTGCCAGGA TTTCCGCCTG
CGTGCCGCCG CCGGCCCTTA TTACTGGTTC CGGCTCAAGG CCCGGCCGGT GATCGGGGCG
GATGGCGAGG TGATCCGCAT CGTCGGCACC ATCGCGGACG TGACGGAGGT GAAGATCGCC
GAGGAGCGCC TGCTCCACGA TGCGGTGCAC GACAACCTCA CGGGCCTGCC GAACCGCGAA
TTGTTCAACG ACCGGCTCGA CGCCGCCCTG ACGCTCGCGG CGCAGGATCC GCGGCTCAAG
CCCACGGTCT TCGTCCTCGA TATCGACCGC TTCAAGCAGG TGAACGACGC GATCGGGCTC
TCGGCGGGCG ATTCGATCCT GCTCACCCTG TCGCGCCGCC TCGGCCGGCT GCTGCGCCCG
CAGGACACGC TGGCGCGGAT CGCCGGCGAC GAGCTCGCGG TGATCCTGGT CTCCGAGCGC
GACCCCGACC GCATCATCGC CTTCGCGGAC ATGATCCGGC GCGCCATCAC CACGCCGATC
ACCTACGCGG ACCGCGAGAT CTTCCTGACG CCCTCGATCG GGGTGGTGCT GCACGAGGCG
GGCAGCAATC CGAAGCGCGA CCAGATCTTC AAGAATGCCG AGATCGCCAT GATCCAGGCC
AAGCGCCAGG GCGGTGACCG GATCGAGGTC TACCGGCCGA CCATGCGCTC GGACCGCGGC
GACCGGCTGA TGCTGGAGAG CGACCTGCGC CAGGCGCTCG AACGCAACGA GATCAAGGTG
CTGTTCCAGC CGATCGTCCG GCTGGAGGAC CGCACGGTCG CGGGGTTCGA GGCGCTGTTG
CGCTGGGACC ATCCCAAGCA CGGGCGCATC CCCCCCCAGA CCTTCATCCC GATCGCGGAG
GAATCCGGCC TCATCGTCGA TCTCGGCGTC TTCGCGCTGG AGCGCACGGC GGCGGAGCTC
GCCGCCTGGC AGCAGGCGCT GGTGGTCGAG CCGCCGCTCT TTGCCTCCGT CAACGTCTCC
TCGCGCCAGC TCCTGCGCCA CGACCTCCTG CACGACGTGA AGACGGTGCT CGCCCGCACC
GGCGTCGCCC CCGGGTCGCT CAAGCTCGAA CTCACCGAGA GCCTGGTGAT GGAGAACCCG
GAATACGCCG CGCAGATGCT CGCCCGCATC GCCGAACTCG GCGCCGGCCT CTCCCTCGAC
GATTTCGGCA CCGGCTACTC GGCGCTGGCC TATCTCCAGC GCTTCCCGTT CGACACGATC
AAGATCGACC AATCCTTCGT GCGCCAGATG GCGAACGGCC GCTCGGTGAT CCTGCGCTCG
ATCGTGCGGA TGGCGCAGGA GCTGGGGCTC GAGATCGTGG CCGAGGGTGC CGAGACCGAG
GCGGATGCGC GGGCGCTGGC GGAGATCGGG TGCGATTACG CGCAGGGCTT CGCCTTCGGC
GAGCCGATGT CGGTCCATCA GGCCCGCCAG CTCGTGGGAG CGGCGCCGGC CGCCGCGTGA
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| Protein sequence | MRHASLALAL LVALAGALLP SAARALEAVR VGLDAQAIDL TPAIERYRSD GDLIQISTAP
GKDGIVRRIA VKARETGARP DWIVFALTND TDEQIDRLLV APHFRLVGSG IIWPDLGGSR
IAAITASQGI RPERDESPDA DQFTVTLDPG TTVTFVAELR TPNVPQLYLW DQDAYRKKAT
GLTLYKGIII GIAGLLALFL TVVFVVKGAI IFPAAAALAW SVLAYTCIDF GFFQRIFPVT
EAAERVYRAS AEAVLGATLL VFLFAYLNLA RWHVRYSHVA LLWLIFLAGL VALAVVDPPV
AAGVARISIA TVAGVGLLLV VYLAAHNGYD RAILLIPTWL LLTAWVVAAG FAITGQLRND
LVQPALIGGL VLIVMLIGFT VLQHAFAGGG IGTAVVSDTE RRALALTGAG DVVFDWDVPG
DRVFAGPEIE SQLGLKRGAL EGPAANWLAL LHPFDVDRYS AALDTVIEER RGRICQDFRL
RAAAGPYYWF RLKARPVIGA DGEVIRIVGT IADVTEVKIA EERLLHDAVH DNLTGLPNRE
LFNDRLDAAL TLAAQDPRLK PTVFVLDIDR FKQVNDAIGL SAGDSILLTL SRRLGRLLRP
QDTLARIAGD ELAVILVSER DPDRIIAFAD MIRRAITTPI TYADREIFLT PSIGVVLHEA
GSNPKRDQIF KNAEIAMIQA KRQGGDRIEV YRPTMRSDRG DRLMLESDLR QALERNEIKV
LFQPIVRLED RTVAGFEALL RWDHPKHGRI PPQTFIPIAE ESGLIVDLGV FALERTAAEL
AAWQQALVVE PPLFASVNVS SRQLLRHDLL HDVKTVLART GVAPGSLKLE LTESLVMENP
EYAAQMLARI AELGAGLSLD DFGTGYSALA YLQRFPFDTI KIDQSFVRQM ANGRSVILRS
IVRMAQELGL EIVAEGAETE ADARALAEIG CDYAQGFAFG EPMSVHQARQ LVGAAPAAA
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