Gene Mnod_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0220 
Symbol 
ID7304546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp247258 
End bp248010 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID643598001 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_002495567 
Protein GI220920266 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.740885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATA CCGCCCTTGC ACTGTTCCTG GACTTCGACG GCACGCTCGT CGACATCGCC 
CCGCGGCCCG ATCAGGTGGT CGTGCCCGCG GAGCTTCCCG CGGCGCTCGC GACGCTGCGC
GGCAGGCTCG GCGGCGCGCT CGCCATCGTC ACCGGCCGCC CGATCGCCAC GATCGACGGC
TTTCTCGCGC CCGAGCGCTT CGATGTCGGC GGCCTGCACG GCGTCGAGAT GCGGCGCGGC
GACCGGGTGG CGGGCTGCGA GCCCTCCGCC CATCCGACGC TCCGTGCGGG TGTCGCGCGG
CTGCAGGACC AGACCGCCCC GCTCGAGGCG GTGCTGATCG AGGACAAGGG CTGCTCGGTG
GCGGTGCATT GGCGCCTCGC GACCCCGACC GACGCCCGCA AGGCGCAGGA CGCGGTCGAG
CGCCTCGCGG CGGATCTCGG CTCCGCCTAC CGGCTGCAGC TCGGCAAGGC CGTGGGCGAG
ATCCTGCCCG CGACGGCCAC CAAGGGCCAT GCGATCCGGG CCTTCCAGGA AGATGCGCCC
TATGCGGGCC GCCGCGCCGT CTTCTTCGGC GACGACCTCA CCGACGAGAA GGCCTTCGCG
ACCGTCAACG CGGATGGGGG CGTGAGCGTG CGCATCGGCG GGGGCGAGAC GATCGCGCAG
CACCGCCTCG CCCAGCCGGA GGATGTGCGC GACCTCATCC TGCGCTGGGC CGGGGGTGCG
CCGGTCGATC CCGAGGCGCT GCCGAGGGCG TGA
 
Protein sequence
MTDTALALFL DFDGTLVDIA PRPDQVVVPA ELPAALATLR GRLGGALAIV TGRPIATIDG 
FLAPERFDVG GLHGVEMRRG DRVAGCEPSA HPTLRAGVAR LQDQTAPLEA VLIEDKGCSV
AVHWRLATPT DARKAQDAVE RLAADLGSAY RLQLGKAVGE ILPATATKGH AIRAFQEDAP
YAGRRAVFFG DDLTDEKAFA TVNADGGVSV RIGGGETIAQ HRLAQPEDVR DLILRWAGGA
PVDPEALPRA