| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0129 |
|---|
| Symbol | |
|---|
| ID | 7304364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 136917 |
|---|
| End bp | 138092 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643597906 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_002495479 |
|---|
| Protein GI | 220920178 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.162314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAGC GTGTCGTGCC TTGGCAAGAG GTGTCAGTCA TAGACAACCG CGCCGAGTTC
GTGGGTCTGG CCCAGCAGGA GGCGGCGAAC GTGGCGGCGC TGTGCCGCCG CTTCGGGATC
AGCCGCAAGA CTGGCTACAA GTGGCTGGGC CGGGCGCGGA GTGGCGCGGG CTTGGACGAC
CGCTCGCGGC GCCCGCACGC CAGCCCGGCC CGCACGTCCC CCGAGATGGA GGAGGCGGTG
CTGGAACTGC GCACGGCTCA TCCGAGTTGG GGTGGGCGCA AGCTGCGCCG ACGGCTGCAG
GATCAGGGCC AGGAGGTGGT CCCGGCCGCC TCGACGATCA CCGCCGTGCT GGCGCGCCAC
GCCCGGCTGG GCCAACCCGA TGCCCCCAGC ATCCCGTTCA CCCGCTTCGA GCACCCCCGG
CCCAACGCTC TCTGGCAGAT GGACTTCAAG GGCCACTTCG CCCATGCCGG CGGCCGCTGC
CACCCTCTCA CCGTGCTGGA CGACCACAGC CGCTACGCGC TCTGCCTGGC GGCCTGTGCC
GACGAGGTCA CCGCGACCGT GCAGGGGCAG CTGAGTGCCA CGTTCCGGCG CTACGGCCTG
CCCGAGCGGA TCAACCTGGA CAACGGCAGC CCCTGGGGCA ACGGACCGGG CCAGCGCTAC
ACGCCTCTCA CCGTGTGGCT GCTGCGGCTG GGCATCCACA TCAGCCACAG CCGGCCCTAC
CATCCGCAGA CCAACGGCAA GGACGAGCGC TTCCATCGCA CCCTCAAGCG CGACGTGCTG
CATGGCGCGT TCTACGCCAG CCTGGCGGCC TGCCAGCGGG CGTTCGATCG CTTCCGGCTG
ATCTACAACA GCGAGCGCCC GCACGAGGCC TTAGGCTTGG CGGTGCCGGC CAGCCGCTAC
CAGATCAGCC GGCGCGCTTA TCCGGCCGAG CTGCCGGCGA TCGAGTACGA TCCGACCGAT
CAGGTGCGGC GCGTGCAGCG GGACGGCTGG ATCAGCGTGC GCGGCCAGCT CGTGCGAGTG
CCCAAGGCGT TCGTCGGCCA GCCGCTGGCC CTGCGGCCCA CTCAGACCGA TGGTCGGGTC
GACCTTGTGT TCATCACCCA CAGGGTGGGG CAGATCGACC TGACACAGCC AACACTCAGG
GTGCAACCTG TCACCCATGT CTCCGAACAC CTGTAA
|
|---|
| Protein sequence | MRERVVPWQE VSVIDNRAEF VGLAQQEAAN VAALCRRFGI SRKTGYKWLG RARSGAGLDD
RSRRPHASPA RTSPEMEEAV LELRTAHPSW GGRKLRRRLQ DQGQEVVPAA STITAVLARH
ARLGQPDAPS IPFTRFEHPR PNALWQMDFK GHFAHAGGRC HPLTVLDDHS RYALCLAACA
DEVTATVQGQ LSATFRRYGL PERINLDNGS PWGNGPGQRY TPLTVWLLRL GIHISHSRPY
HPQTNGKDER FHRTLKRDVL HGAFYASLAA CQRAFDRFRL IYNSERPHEA LGLAVPASRY
QISRRAYPAE LPAIEYDPTD QVRRVQRDGW ISVRGQLVRV PKAFVGQPLA LRPTQTDGRV
DLVFITHRVG QIDLTQPTLR VQPVTHVSEH L
|
|---|
| |