Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0122 |
Symbol | |
ID | 7304357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 129870 |
End bp | 131753 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643597899 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002495472 |
Protein GI | 220920171 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.134725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTTG CCATCGCGAC CGTCTGCCTG AGCGGCACGC TCGGCGAGAA GCTGGAGGCG ATCGCCGCCG CCGGCTTCAC GCAGGTCGAG ATCTTCGAGA ACGACCTTCT GTCCTTCAGC GGCACGCCTC GCGACGTGCG CCGCATGGCC GAAGACCTCG GCCTCTCGGT CGCCGTCTAC CAGCCGTTCC GCGATTTCGA GGGCATGCCC GAGCCGCAGC GGGCCAAGGT CTTCGCCCGC GCCGAGCGCA AGTTCGACAC CATGCAGGAG CTCGGCTGCG ACCTTTTGAT GGTCTGCTCC AACGTCTCGC CCGACAGCCT CGGCGGCATC GACCGGGCGG CCGCGGATTT CCGGGAGCTC GGCGAGCGGG CGCAGGCGCG CGGCTTCCGC GTGGGCTACG AGGCCTTGGC CTGGGGGCGG CACGTCAATG ATTACCGCGA TGCCTGGGAG ATCGTGCGCC GGGCCGACCA TCCGGCGGTC GGCTTCGTGC TCGACAGCTT CCACGTGCTC GCCCGCGGCA CCGATCTGAG TGCCATCCGG TCGATCCCGA AGGAGAAGAT CGTCCTGGTG CAGATGGCCG ACGCGCCGAA GCTCGCCATG GATTACCTGT CCTGGAGCCG CCACTACCGC TGCTTCCCCG GCCAGGGAGA GCTGCCGATC ACCGCCTTCG CGGACGCGCT GGGGGCGACG GGCTTCGACG GCCTGATGTC GCTCGAGATC TTCAGCGACC GGTTCCGGGC CGGCTCGGCG CGCAGCGTCG CGGTCGACGG CCGCCGGTCC CTCCTCGTCA TGCTCGACGA CCTGCGCCGC CGCTCATCCG TGCCGAATCT CCCGGTGCTG CCGCCGCGCG CGGCTTGCGA GGGCGTCGAG TTCATCGAGT TCGCGATGGA CGATGAGGCC GCCGCCTCCT TCGAGCGCAT GCTCGGCGGG CTCGGCTTCG CCCGGACCGC CCGCCACCGC TCGAAATCCG TGACGCGCTG GAGCCAGGGC GGCATCAACC TCGTGGTCAA CACTGAGAAG GAGGGATTCG CTCATTCCTT CCAGGTCACG CATGGCGCCT CGGTCTGCGC CGTCGCCCTG AAGGTCGACG ATGCGCAGGC GGCGGTGGAG CGGGCCGTCG CGCTCCTCGA CGAGCCGTTC CGGCAGGCGG TCGCACCGGG CGAGCTCGAC ATCCCGGCGG TGCGTGGGGT CGGGGGCAGC CTCCTCTACT TCGTCGACCG CCGCAGCGGC CTCGACCGGC TGTGGAACGT CGATTTCGAG CCGGTCGCAA CGGAACCGAC CGGGGATGCG GGCCTCATCG CGGTCGATCA CCTCTCGCAG AGCATGCGCC ACGAGGAGAT GCTGACCTGG CTCCTGTTCT ACACCGGGCT GTTCGACCTC GCGCAGCAGC CGGTGCAGGA CGTGGTGGAT CCCGGCGGCG TGGTGCAGAG CCAGGCCGTC GAGGCGCCCG GCGGGGCGTT GCGCCTCGTC CTCAACGCCT CGCAGAGCCG CCAGACGCTG TCGTCGCGCT TCCTCTCGGA AGCCTTCGGC GGAGGCGTGC AGCATGTGGC GCTCGCCACC GACGACATCT TCGCGACCGT CGAGGCGCTG CGGGCGAACG GTGTCGACCT CCTGCCGATC CCGGAGAACT ACTACGACGA TCTCGAAGTC CGGACCGACC TGAGCGCGGA GACGATCGCG CGGCTGCGCG CCGGCAACAT CCTCTACGAC CGCGACGGAC AGGCCGAGTT CTTCCAGGTC TATACGCGCA GCGTGCTCGA GGGCGGGTTC TTCTTCGAGA TCGTCGAACG GCGTGACTAT CGCGGCTACG GGGCCATCAA CGCGCCGATC CGTCTTGCGG CGCAGACCCA TCTCGCGCCA CATCCGGCGC TCCCCACCCG TTAG
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Protein sequence | MRLAIATVCL SGTLGEKLEA IAAAGFTQVE IFENDLLSFS GTPRDVRRMA EDLGLSVAVY QPFRDFEGMP EPQRAKVFAR AERKFDTMQE LGCDLLMVCS NVSPDSLGGI DRAAADFREL GERAQARGFR VGYEALAWGR HVNDYRDAWE IVRRADHPAV GFVLDSFHVL ARGTDLSAIR SIPKEKIVLV QMADAPKLAM DYLSWSRHYR CFPGQGELPI TAFADALGAT GFDGLMSLEI FSDRFRAGSA RSVAVDGRRS LLVMLDDLRR RSSVPNLPVL PPRAACEGVE FIEFAMDDEA AASFERMLGG LGFARTARHR SKSVTRWSQG GINLVVNTEK EGFAHSFQVT HGASVCAVAL KVDDAQAAVE RAVALLDEPF RQAVAPGELD IPAVRGVGGS LLYFVDRRSG LDRLWNVDFE PVATEPTGDA GLIAVDHLSQ SMRHEEMLTW LLFYTGLFDL AQQPVQDVVD PGGVVQSQAV EAPGGALRLV LNASQSRQTL SSRFLSEAFG GGVQHVALAT DDIFATVEAL RANGVDLLPI PENYYDDLEV RTDLSAETIA RLRAGNILYD RDGQAEFFQV YTRSVLEGGF FFEIVERRDY RGYGAINAPI RLAAQTHLAP HPALPTR
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