Gene Mnod_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0033 
Symbol 
ID7306456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp32653 
End bp34866 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content68% 
IMG OID643597812 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_002495387 
Protein GI220920086 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0805282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCC AGTACGAACT CGTCGAGCGG GTGAAGGCCT ACAATCCCGC CGCCGACGAG 
GCGATGCTCA ACCGGGCCTA CGTCTATGCC ATGCGGGCGC ACGGCTCGCA GATGCGGGCA
TCCGGCGACC TGTTCTTCGC CCATCCGCTC GAAGTCGCGG CGATCCTCAC CGAGCTGCGC
GTCGACGATG CCACCATCGT GGCGGCGGTG CTGCACGACA CGGTCGAGGA CACGGCTGCC
ACCCTGGAGG AGATCAACCG CACCTTCACG CCCGAGATCG GCACCCTCGT CGACGGTCTC
ACCAAGATCA AGCGCCTCGA CCTCGTCTCC AAACAGGCGG CGCAGGGCGA GAATTTTCGC
AAGCTGCTGC TCGCCATCGC GGCGGACGTG CGGGTGCTGC TGGTCAAGCT CGCCGACCGG
CTGCACAACA TGCGCACGCT GCACCACATG CCGCCGGAGA AGCGCGTCCG CATCGCCCAG
GAAACCCTCG ACATCTATGC GCCGCTCGCC GGCCGCATGG GGATGCAGGA GCTGCGCGAG
GAACTGGAGG ATCTCTCCTT CCGCAACCTC AAGCCCGACG TCTACGCGAC GATCAGCAAG
CGGCTCGACG ACCTCACGAC CAAGTCCGAG AGCCTCGTCG AGAGCATCGA GCGCGATCTC
GTCCAGCGGC TCGCGGCCAA AGGCATCACC GCGCAGGTCA GGGGGCGCCA GAAGCGGCCC
TACTCCATCT GGAGCAAGAT GGAGCGCAAG TCCGTCGCCT TCGAGCAATT GTCGGACATC
TTCGGCTTCC GGGTCGTGGT CGATTCGGTC GACACCTGCT ACCGGGCACT CGGCGTCGTG
CACACGACCT GGCCGATGGT GCCGGGGCGC TACAAGGACT ACATCTCGAC CCCGAAGCAG
AACGACTACC GGTCGATCCA CACCACGGTG ATCGGGCCGA AGAGCCAGCG CGTCGAACTG
CAGATCCGAA CCGCCGAGAT GGACGAGGTG GCGGAGTACG GCATCGCCGC GCATGCCCTC
TACAAGGACG GCTCGCCCCA TCTCGCCACC GAGAGCGGCG CCTATCAGTG GCTGCGCCGC
ACCATCGAGC TCCTCGCCGA GGGCGACAGC CCGGAAGAAT TCCTGGAGCA CACCAAGCTC
GAACTCTTCC AGGATCAGGT CTTCTGCTTC ACGCCGAAGG GCCGGCTGAT CGCGCTGCCG
CGTGGGGCGA CGCCGATCGA TTTCGCCTAC GCGGTCCATA CCGAGCTCGG CAACGCCGCG
GTCGGCGCCA AGATCAACGG GCGCATCGCG CCGCTCCTCA CCGAGCTGCA GAACGGCGAC
GAGGTCGAGA TCGTGCGGGC GGACGGTCAG ACCCCGCCCG CGGCCTGGGA ATCCCTCGTC
GTCACCGGCA AGGCGCGGGC GGCGATCCGG CGGGCGACGC GCTCGGCGGT GCGGCGGCAA
TATGCGGGGC TCGGGCGCCA GATCCTCGAC CGCGCCTTCG AGCGCGCCGG CAAGAATTTC
TCCGACGAGA AGCTGCGCGG CGCCCTCCCC CGCCTCGCCC GCACCTCCGC CGAGGACGTC
TTCGCGGCGG TGGGCCGGGG CGAGATGTTC TCAGGGGACG TCGTGAAGGC GGTCTATCCC
GACTACAAGG ACGAGCGGCG CAGCCAGTCT GCCGCCACGG GGCCCAAGCC CCACGTCAAC
GGGGCGGGCC GCCTCTCCCT CGACAAGGAC CAGACGGTGC GCCTGACCTG GCCCGGCAAG
GGGCGCGGCG AGGAAGACGA GGGCGCGATC CCGATCCGCG GCCTCGACCG CGACCTGCCG
GTGCGCTTCG CGCCCGAGGG CGGCGCGGTG CCGGGCGACC GCATCGTCGG CATCCTCACG
CCCGGCGAGG GCGTGACCAT CTACCCGATC CAGTCCCCGG CCCTCGCCGC CTTCGACAAC
GAGCCCGACC GCTGGCTCGA CGTGCGCTGG GACGTGGACG GCGGCTCGAA TCAGCGCTTC
CCGGCCCGCA TCGCCCTGCA ATCCATCAAC GAGCCCGGCA GCTTCGCCCA GATCGCCCAG
GTGATCGCCG ACCACGACGG CAACATCGAC AACATCTCGA TGAAGCGGCG CAGCCAGGAC
TTCACCGATG TCCTCATCGA CCTGTCGGTC TGGGACCTGA AGCACCTCAA CGCGATCGTC
TCGGAGCTGC GGGCCAAGCG CGTGGTGAGC CGGGTCGAGC GGGTGAACGG GTGA
 
Protein sequence
MMRQYELVER VKAYNPAADE AMLNRAYVYA MRAHGSQMRA SGDLFFAHPL EVAAILTELR 
VDDATIVAAV LHDTVEDTAA TLEEINRTFT PEIGTLVDGL TKIKRLDLVS KQAAQGENFR
KLLLAIAADV RVLLVKLADR LHNMRTLHHM PPEKRVRIAQ ETLDIYAPLA GRMGMQELRE
ELEDLSFRNL KPDVYATISK RLDDLTTKSE SLVESIERDL VQRLAAKGIT AQVRGRQKRP
YSIWSKMERK SVAFEQLSDI FGFRVVVDSV DTCYRALGVV HTTWPMVPGR YKDYISTPKQ
NDYRSIHTTV IGPKSQRVEL QIRTAEMDEV AEYGIAAHAL YKDGSPHLAT ESGAYQWLRR
TIELLAEGDS PEEFLEHTKL ELFQDQVFCF TPKGRLIALP RGATPIDFAY AVHTELGNAA
VGAKINGRIA PLLTELQNGD EVEIVRADGQ TPPAAWESLV VTGKARAAIR RATRSAVRRQ
YAGLGRQILD RAFERAGKNF SDEKLRGALP RLARTSAEDV FAAVGRGEMF SGDVVKAVYP
DYKDERRSQS AATGPKPHVN GAGRLSLDKD QTVRLTWPGK GRGEEDEGAI PIRGLDRDLP
VRFAPEGGAV PGDRIVGILT PGEGVTIYPI QSPALAAFDN EPDRWLDVRW DVDGGSNQRF
PARIALQSIN EPGSFAQIAQ VIADHDGNID NISMKRRSQD FTDVLIDLSV WDLKHLNAIV
SELRAKRVVS RVERVNG