Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4407 |
Symbol | oppD |
ID | 5369164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5007314 |
End bp | 5008303 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640806813 |
Product | oligopeptide transporter ATP-binding component |
Protein accession | YP_001343237 |
Protein GI | 152998402 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAT CAAATTCTAA AAATTTGTTA GAAGTTAATA ACTTACGCGT TAACTTCAGA ACACCAGATG GTCTTGTGAC TGCGGTAAAT GATCTGAACT TTACCTTGGC GCAAGGCGAA ACTCTCGGTA TCGTGGGTGA ATCTGGTTCT GGTAAAAGCC AAACTGCATT TGCCCTTATG GGCTTGTTGG CAGGCAATGG CATTATTGAA GGGGAAGCAC GCTTTAACGA GCAAAACATT CTGACCCTGA ATGAAAAAGC CATGAACCGC ATCCGCTCCA AAGAAATTGC GATGATTTTC CAAGATCCAA TGACGTCATT GAATCCTTAT ATGAAAGTCG GCAAACAGCT GATGGAAGTC TTAATGCTGC ACAAAGGTAT GAGCAAAGCC GAAGCGTTTG AAGCATCGGT TAAAATGCTT GATGCCGTGA AGATGCCTGA AGCACGCAAA CGCATGAACA TGTATCCACA TGAGTTTTCT GGCGGTATGA GACAGCGTGT GATGATCGCT ATGGCTTTGT TGTGCCAACC GAAACTCTTG ATTGCGGATG AGCCAACCAC CGCTCTAGAC GTGACGGTAC AAGCACAGAT TCTCACCTTG CTGAACGAGT TAAAAGACGA CTTCAATACT TCCATCATTA TGATTACTCA TGATTTGGGC GTGGTCGCAG GCTTATGCGA CAAAGTACTG GTTATGTATG CCGGACAAAC CATGGAATAC GGCACAGCAG AAGACGTGTT TTATCGCCCT ACCCATCCGT ATACTCAAGG ATTGTTAAAA GCGATTCCTC GCCTAGATGC TGATGACGAG AAGCTATCAA CCATTCCGGG TAATCCACCA AACCTGTTAC AGATGCCATC TGGTTGCCCG TTCCAAGCCC GTTGTGAGTT TGCTAAAGAT CGCTGTGGTG AAAGCATGCC ACCGCTTGAA GAATATGCAC CGGGCCAACT ACGAGCTTGT CATAAATCCG TTGATGGATG GGTCGTCTAA
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Protein sequence | MSLSNSKNLL EVNNLRVNFR TPDGLVTAVN DLNFTLAQGE TLGIVGESGS GKSQTAFALM GLLAGNGIIE GEARFNEQNI LTLNEKAMNR IRSKEIAMIF QDPMTSLNPY MKVGKQLMEV LMLHKGMSKA EAFEASVKML DAVKMPEARK RMNMYPHEFS GGMRQRVMIA MALLCQPKLL IADEPTTALD VTVQAQILTL LNELKDDFNT SIIMITHDLG VVAGLCDKVL VMYAGQTMEY GTAEDVFYRP THPYTQGLLK AIPRLDADDE KLSTIPGNPP NLLQMPSGCP FQARCEFAKD RCGESMPPLE EYAPGQLRAC HKSVDGWVV
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