Gene Mmwyl1_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_4407 
SymboloppD 
ID5369164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp5007314 
End bp5008303 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID640806813 
Productoligopeptide transporter ATP-binding component 
Protein accessionYP_001343237 
Protein GI152998402 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT CAAATTCTAA AAATTTGTTA GAAGTTAATA ACTTACGCGT TAACTTCAGA 
ACACCAGATG GTCTTGTGAC TGCGGTAAAT GATCTGAACT TTACCTTGGC GCAAGGCGAA
ACTCTCGGTA TCGTGGGTGA ATCTGGTTCT GGTAAAAGCC AAACTGCATT TGCCCTTATG
GGCTTGTTGG CAGGCAATGG CATTATTGAA GGGGAAGCAC GCTTTAACGA GCAAAACATT
CTGACCCTGA ATGAAAAAGC CATGAACCGC ATCCGCTCCA AAGAAATTGC GATGATTTTC
CAAGATCCAA TGACGTCATT GAATCCTTAT ATGAAAGTCG GCAAACAGCT GATGGAAGTC
TTAATGCTGC ACAAAGGTAT GAGCAAAGCC GAAGCGTTTG AAGCATCGGT TAAAATGCTT
GATGCCGTGA AGATGCCTGA AGCACGCAAA CGCATGAACA TGTATCCACA TGAGTTTTCT
GGCGGTATGA GACAGCGTGT GATGATCGCT ATGGCTTTGT TGTGCCAACC GAAACTCTTG
ATTGCGGATG AGCCAACCAC CGCTCTAGAC GTGACGGTAC AAGCACAGAT TCTCACCTTG
CTGAACGAGT TAAAAGACGA CTTCAATACT TCCATCATTA TGATTACTCA TGATTTGGGC
GTGGTCGCAG GCTTATGCGA CAAAGTACTG GTTATGTATG CCGGACAAAC CATGGAATAC
GGCACAGCAG AAGACGTGTT TTATCGCCCT ACCCATCCGT ATACTCAAGG ATTGTTAAAA
GCGATTCCTC GCCTAGATGC TGATGACGAG AAGCTATCAA CCATTCCGGG TAATCCACCA
AACCTGTTAC AGATGCCATC TGGTTGCCCG TTCCAAGCCC GTTGTGAGTT TGCTAAAGAT
CGCTGTGGTG AAAGCATGCC ACCGCTTGAA GAATATGCAC CGGGCCAACT ACGAGCTTGT
CATAAATCCG TTGATGGATG GGTCGTCTAA
 
Protein sequence
MSLSNSKNLL EVNNLRVNFR TPDGLVTAVN DLNFTLAQGE TLGIVGESGS GKSQTAFALM 
GLLAGNGIIE GEARFNEQNI LTLNEKAMNR IRSKEIAMIF QDPMTSLNPY MKVGKQLMEV
LMLHKGMSKA EAFEASVKML DAVKMPEARK RMNMYPHEFS GGMRQRVMIA MALLCQPKLL
IADEPTTALD VTVQAQILTL LNELKDDFNT SIIMITHDLG VVAGLCDKVL VMYAGQTMEY
GTAEDVFYRP THPYTQGLLK AIPRLDADDE KLSTIPGNPP NLLQMPSGCP FQARCEFAKD
RCGESMPPLE EYAPGQLRAC HKSVDGWVV