Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4381 |
Symbol | |
ID | 5366141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4977699 |
End bp | 4978559 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640806787 |
Product | transcription activator effector binding |
Protein accession | YP_001343211 |
Protein GI | 152998376 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins [COG3449] DNA gyrase inhibitor |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.134609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCATCGA TAAAGTACTA CGAAAAACGC ATGCTAGCAG TATGTGATTA CATTTATAAG CATTTAGACG ATGATCTTAC CGTCGAAGCG TTATGTGATG TTGCCTGTTT TTCTAAATAC CATTTTCATC GGCAGTTCAC ACATTTCATG GGTGTTGGCG TATTTAAATT TGTGCAGATC TTACGCTTGA AACGGGCTTC TTATGAATTG GTGTTTACTA AAGAAAAACG CATCATTGAT ATTGCAATGA GCGCGAAATT CGATCACCCA GAATCTTTCT CAAGGGCTTT CAAAAAAGCC TATTTGCAAT CCCCAAGCGA GTTTCGTCGT CATCCAGATT TAGAAAAATT AGGTCTGCAC TTTCATAAAC TTGAGAGGCA ATTAGAACCC TATATGACGG TAGACATCGT TCACTTCGAT ACGACAAAGA TAGCCCTGCT AAAGCATCGA GGTTCGCCTA GTCGGATTAT GGAATCGGTC GCGATATTTA GAGAATGGCG CAAATCATCG GGCTTATCAC CCATAACGAA AAGTCGAACC TTCAATATTA TCTATGAAGA CCCAGCTGTG GTGGTCGCAG AAGACTTTCG TTGTGACCTA GCAGCGGAAG TGATGAAGGA AGTGGATGAC AATGAGTACG GCGTCATTAA TAGTACCTTA GCTGGTGGTC GCTACGCCGT TGTTCGTCAC TTTGGTCCTT ATGACAGTAT CAGCCGCTGT TTGTATTTCC TTTATGGGGA ATGGTTACCT GACAGTGGCG AAGAGCTGGG AGATGCCCCA TGCTTTTTTC AATATCACAA CCATTTTCCA GAAGTGGCGG AGCATGAACT CATTACGGAT GTGTACTTAC CTCTAAAATA A
|
Protein sequence | MASIKYYEKR MLAVCDYIYK HLDDDLTVEA LCDVACFSKY HFHRQFTHFM GVGVFKFVQI LRLKRASYEL VFTKEKRIID IAMSAKFDHP ESFSRAFKKA YLQSPSEFRR HPDLEKLGLH FHKLERQLEP YMTVDIVHFD TTKIALLKHR GSPSRIMESV AIFREWRKSS GLSPITKSRT FNIIYEDPAV VVAEDFRCDL AAEVMKEVDD NEYGVINSTL AGGRYAVVRH FGPYDSISRC LYFLYGEWLP DSGEELGDAP CFFQYHNHFP EVAEHELITD VYLPLK
|
| |