Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4296 |
Symbol | mdoD |
ID | 5369092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4862136 |
End bp | 4863842 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640806698 |
Product | glucan biosynthesis protein D |
Protein accession | YP_001343126 |
Protein GI | 152998291 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000183317 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTCCTC ATTGTTTTTC AGAGTCCATG AAGGATTCAA ACTTAGTCGG GCCGCAGGTT GTGCGAAAAT CCCGAAAAAC AAATGTGTCT AGTAATTTGC AGCGCTTGGC GAGTCGATCT TTATTGGCCG TCGGTGTGCT ATTTAGCCTT ACTGCATGCG CAGCGCAATC ACAGTCGCAA CCATCTCAAT CTGTCGCTCA ACCTAAAGAA GGTGAAGAAT TTAGCTATGC TTGGTTAAAA GGCCATGCTC GTCAATTGGC GACTAAGCCT TATGAAAGCC ATCAAGGTGA AATGCCAGAT AGTTTAAAAG GCTTAGACTG GGATGATTAT CAAGAAATTC GCTTTAATAA AGAGGCGGCT TTGTGGCGTG ATCAAAAATC AGAGTTCCGT ACGGAGCTTT TTCATCTTGG TCTAGGGTTT GATACGCCAA TTCATATGAA TGAGCTTGAA AATGGTAAGT CGACTCCGAT TCCTTACATG CCTTCTGAGT TTACTTACGG TAAATCTAAA GTAGATGGTA AAAAACTTCC TAAAGATCTT GGTTTTGCAG GTTTTAGAAT GCAATTCGCC ACAGATTGGC AGCGCGATGT TGTCGCTTTT TTAGGGGCGA GTTATTTCCG TGCTGTTGGC AGTGAAATGC AATATGGTCT TTCCGCTCGA GGCTTAGCGA TTGATACCGC AATGCCGCAC CCTGAAGAGT TTCCTATTTT TACTGACTTT TGGTTAGAGA AGCCAAAACC AGGTTCGGAT GTGGTGACGG TTTACGCTTT AATGGATTCT CCTAGTGTAA CTGGGGCTTA TCGTTTTGAT ATGACTCCGG GGGAACCGTT CAAAATGCGC GTAGATTCCG CTATTTATCC GCGCAAATCT GTTGAACGTT TAGGTGTGGC GCCAATGACT AGTATGTTTA TGGTTGGCGA AAATGATCGT CGAACCAATT ATGATTGGCG TGCAGAGATT CATGACTCGG ATGGCCTTGC TATGCAAACC GGCAACGGCG AATGGATTTG GCGACCATTA TCCAACCCTG AAAATTTACA ATTTAATGCT TACAGCGATG AGAATCCAAA AGGCTTTGGT TTGCTGCAGC GTGACCGTAA TTTCGATCAT TATCAAGATG ACGGTGTTTT CTATGAGAAG CGCCCAAGTT TGTGGATTGA GCCACTTGGT AACTGGGGTA AGGGGTCTGT GCAATTAGTA GAAATTCCGA CTCTGGATGA AACTTTCGAT AACATCGTTG CTTTCTGGAA TCCAGCGGCT CCGGTTAAAG CGGGTCAAGA GTTACTTTAC AGCTACAATA TGTATTGGGG AAGTCATCCT CCGGTGCAAT CTAACCGTGC TCGAGTTGTT GATACTTTTA CAGGTATCGG TGGTGTGATT GGTAAAAAAC GTCAATATTA CAGCAAACGT TTTGTGGTTG ATTTTGCTGG TGGTTCATTG GCGATGTTAG GCAATGATAC GAAAGTGAAA GCGGTGATTA CATCGTCTGA AGGTAGGGTG GAAATTGAAT CTGCTCGACC ACTGCATTCT ATCAATGGTT ACCGTGCGAT GTTTGATTTG GTACCACCGA AAGGCAAGTC TAAGCCAATT AATTTAACGG TTCACTTGGA AGCTAACGGA CAGCCGCTAA CTGAGACTTG GCAGTATCAG TGGACTCCAC CAGCGGAGAA AGATAGAGAA CTTCATAATG CTGGTCATTT GAAGTAG
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Protein sequence | MLPHCFSESM KDSNLVGPQV VRKSRKTNVS SNLQRLASRS LLAVGVLFSL TACAAQSQSQ PSQSVAQPKE GEEFSYAWLK GHARQLATKP YESHQGEMPD SLKGLDWDDY QEIRFNKEAA LWRDQKSEFR TELFHLGLGF DTPIHMNELE NGKSTPIPYM PSEFTYGKSK VDGKKLPKDL GFAGFRMQFA TDWQRDVVAF LGASYFRAVG SEMQYGLSAR GLAIDTAMPH PEEFPIFTDF WLEKPKPGSD VVTVYALMDS PSVTGAYRFD MTPGEPFKMR VDSAIYPRKS VERLGVAPMT SMFMVGENDR RTNYDWRAEI HDSDGLAMQT GNGEWIWRPL SNPENLQFNA YSDENPKGFG LLQRDRNFDH YQDDGVFYEK RPSLWIEPLG NWGKGSVQLV EIPTLDETFD NIVAFWNPAA PVKAGQELLY SYNMYWGSHP PVQSNRARVV DTFTGIGGVI GKKRQYYSKR FVVDFAGGSL AMLGNDTKVK AVITSSEGRV EIESARPLHS INGYRAMFDL VPPKGKSKPI NLTVHLEANG QPLTETWQYQ WTPPAEKDRE LHNAGHLK
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