| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4081 |
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| Symbol | |
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| ID | 5366906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4611768 |
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| End bp | 4613450 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640806474 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001342912 |
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| Protein GI | 152998077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG AAACGTACGA TTACATCATT GTCGGTGCTG GCTCTGCAGG CTGTGTGTTA
GCGGACCGAC TAACCGAAAG TGGCGAACAC AAAGTGCTGT TGCTGGAAAT GGGTGGCTCA
GATAAGAGCG TCTTTATCCA AATGCCAACC GCTTTGTCTT ATCCCATGAA TACCAACAAA
TACGCTTGGC AATTTCATAC CGAAAAAGAA CCCGGCCTTG ATGGCCGTGA AATGCATTGT
CCACGCGGCA AAGTACTAGG CGGTTCATCG TCTATCAACG GCATGGTTTA TGTGCGTGGT
CACGCTTGTG ATTTCGACCA ATGGGAAGAA AACGGCGCCA AAGGCTGGAA CTACCAATCT
TGCCTACCCT ATTTCAAAAA AGCCGAAACA TGGAAAGGCG GCGCGGACTT ATACCGTGGC
GGCAATGGCC CATTGTCGAC CAACAACGGC AACGACATGA CCTACAACCC GCTTTACCAA
GCCTTTATCG ATGCTGGCGA AGAAGCCGGC TACGGCAAAA CGGAAGATTA CAATGGCTTC
CGTCAAGAAG GTTTTGGTCC CATGCACATG ACGGTTAAAA ATGGCGTGCG TGCATCTACA
GCTAACGCCT ACTTACGTCG TGCTATGAAG CGCCCTAACC TAACTCTCAA AACTGGCGTG
TTAAGCCATA AAGTCCTCTT TGCAAATGGA AAGGCCAATG GCAAAACCGC CACGGGCATT
GAGTTCAGTA AAAACGGCCA AACTCAACAA GCCAATGCCA GCAAAGAAGT GATTCTATCG
GCTGGCTCGG TTGGTTCACC ACAGTTGTTA CAACTGTCTG GCGTAGGTCC AAAAGACGTC
TTGGAAAAAG CCGGCGTGCC TGTGGTTCAT GAATTACCGG GCGTAGGTGA AAACCTGCAA
GACCATTTGG AAGTCTATTT CCAGTACTAC TGCAAACAAC CCGTGACGCT AAACAGCAAA
CTTGGCTTGA TCAGCAAAGG CTTGATTGGT ACCCGCTGGA TGTTATTTAA AACCGGACTG
GGTGCAACTA ACCACTTTGA ATCTTGTGGT TTTATTCGCT CGCGCTCTGG ACTGAAATGG
CCAAACATTC AATATCACTT CTTGCCAGCC GCCATGCGCT ACGATGGACA AGCCGCCGTG
AAAGGTCATG GTTTCCAAGT ACATGTTGGA CCAAACAAGC CAGAAAGCCG TGGTAAGTTA
TGGATCGAGT CTGCTAATCC AGCTGCGAAA CCGCGTATCT TGTTTAACTA CATTTCGACC
GAGCAAGACA AGCAAGATTG GCGCGATACC ATCCGCCTAA CACGTGAGGT CTTGCAACAA
TCTGCGTTAA ACGAATACCG TGGTGATGAA ATTCAGCCAG GCATGAATAT TCAGAGCGAT
GAAGAAATCG ACCAATGGGT AAGAGAGAAC GTAGAAAGTG CTTACCATCC ATCTTGTACT
TGTAAGATGG GCGACGACAA GGATCCAATG GCCGTGTTGA ATGAACAGTG CCAAGTGCGC
GGAATCGAAA ACTTGCGCGT GGTGGATTCG TCTATATTCC CGACCATCAC CAACGGCAAC
TTAAACGCAC CAACTATCAT GGTAGCGGAA AAAGCCGCCG ACATGATACT TGGTAAAGAC
ACCTTGCCAA GCCTAAATGC GCCCGTTTGG ATTCACCCAG AATTTGAAAC CAAACAGCGT
TAA
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| Protein sequence | MANETYDYII VGAGSAGCVL ADRLTESGEH KVLLLEMGGS DKSVFIQMPT ALSYPMNTNK
YAWQFHTEKE PGLDGREMHC PRGKVLGGSS SINGMVYVRG HACDFDQWEE NGAKGWNYQS
CLPYFKKAET WKGGADLYRG GNGPLSTNNG NDMTYNPLYQ AFIDAGEEAG YGKTEDYNGF
RQEGFGPMHM TVKNGVRAST ANAYLRRAMK RPNLTLKTGV LSHKVLFANG KANGKTATGI
EFSKNGQTQQ ANASKEVILS AGSVGSPQLL QLSGVGPKDV LEKAGVPVVH ELPGVGENLQ
DHLEVYFQYY CKQPVTLNSK LGLISKGLIG TRWMLFKTGL GATNHFESCG FIRSRSGLKW
PNIQYHFLPA AMRYDGQAAV KGHGFQVHVG PNKPESRGKL WIESANPAAK PRILFNYIST
EQDKQDWRDT IRLTREVLQQ SALNEYRGDE IQPGMNIQSD EEIDQWVREN VESAYHPSCT
CKMGDDKDPM AVLNEQCQVR GIENLRVVDS SIFPTITNGN LNAPTIMVAE KAADMILGKD
TLPSLNAPVW IHPEFETKQR
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