Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4073 |
Symbol | |
ID | 5366677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4603701 |
End bp | 4604459 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640806466 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001342904 |
Protein GI | 152998069 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.576341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG CAGTGGATAG AAAAGTCGTT TGGATAACCG GAGCGAGTTC AGGAATTGGC CTTGCGTTGA CCAAACGTTA TTTAGATGAC GGTTGGAGGG TATTAGCCAG TGCGCGTAAG CAAGGCGAGC TAGAGCCTCT ATTAGACAAA CACCAACATT TAACATTTAT TCCTTTTGAT ATAACGGATG ACAGTCAAAT GGATTCCGTC CGAGATACAC TGAGTTCATA TTCTGTCCAT TTAGACTGTG CGGTATTAAA CGCAGGTACC TGTGAGTATT TGGATATGAC GGACACTGAT CCAGATTGGA AAATGATGGA TCGTATTATG TCGGTTAACT TTATTGGTTT GGTGAATAGT GTCGAAGTGT GTTTGCCATT GCTGAAGAAA TCCTTACGTC CGCATTTGAT TGGTGTGAGT TCTCAAGCCG TACAGGCTGC TTTTCCGCAA GCTGAAGCCT ATGGTGCAAG TAAAGCCGCT ATTCGATATT TCTTATCTTC TTTGCGCATG GATTTGAAGC AATTCAATGT CGATGTCACC TGTTTATTGC CGGGTTTTGT TGATACGCCT TTGACGCAGA AAAACACCTT TTCTATGCCG TTTCTAATGT CACCGGATGA TGCTGCAAAA CGCATGTTCA GTGCACTAGA GTCTCGTCCA TTTGAGTACG CCTTTCCAAA ACGGCTAACG GCCATGTTGT GGGCAGGAAG ACATTTCCCA AAATTATGGT TGTCGATGTT GGCGCCAAAA ACTAAATAA
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Protein sequence | MSQAVDRKVV WITGASSGIG LALTKRYLDD GWRVLASARK QGELEPLLDK HQHLTFIPFD ITDDSQMDSV RDTLSSYSVH LDCAVLNAGT CEYLDMTDTD PDWKMMDRIM SVNFIGLVNS VEVCLPLLKK SLRPHLIGVS SQAVQAAFPQ AEAYGASKAA IRYFLSSLRM DLKQFNVDVT CLLPGFVDTP LTQKNTFSMP FLMSPDDAAK RMFSALESRP FEYAFPKRLT AMLWAGRHFP KLWLSMLAPK TK
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