| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4042 |
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| Symbol | dddT |
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| ID | 5365359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4569267 |
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| End bp | 4570847 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640806435 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001342873 |
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| Protein GI | 152998038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA AATCTTATGT TCTCCCAAAA AAAGGATTGT TTTCCGGCAC TCACCCTATT
CTAGCTATCG GCTCCGCCCT TCTAGTGATG GCATTCGTGT TGTTTACCGT TTTGGATCCA
ACCTCTGCAA ACACACTCTA TAGCTCAGCT AATAACTTCA TCTCGTCAAA TTTAGATTGG
TACTACATTG GCTTGATGAG CTTCTTTCTC TTTTTTGCTG TCTGGATGAG CTTGAGTAAA
TACGGCGATA TTCGCTTAGG AAAAGACTCT GATCGGCCAG AATTCAGTAA CTATGCTTGG
TTCTCCATGC TGTTTAGTGC AGGCATTGGT ATTGGTATTC TTTTTTGGAG TATCGCTGAG
CCTATTTATT ACCTCCAAGG CAACCCATTT ATTACTGACG CTCAAGCGGG CACAGTTGCC
GCCGCACAAG TTGCAATGCG AGTGGCCATC TTCCATTGGG GTCTTCATGG CTGGGCATTA
TTTGCCGTAA TTGGTTTAGC CTTGGCTTAT TTTTCTTATA GAAAAGGACT CCCGCTTTCT
ATCCGATCTA GCTTGCATCC CATTTTTGGC GACCGCATCT ATGGACCAAT CGGTCACGCT
GCAGATTTAC TCGCAGTATT CGGTACCGTA TTTGGTATTG CGACGTCTTT AGGATTGGGC
GCCCAACAGA TGAACGCGGG GCTGTCTTAT TTATTTGGTT TCGAGATTTC AACAACTAAC
CAAATCATCC TCATCGCCAT CTTGTCTGTG ATTGCAACAG GATCCGTTTT AACTGGCCTA
AATAAAGGCA TCAAGATTTT AAGTGAATGG AATATGCACT TAACCATAGT GATCCTTTTG
CTCTTCATTG TTTTTGGTCC AACGGTTTAT GTGCTTGGTG CCTTTGTGAC TAACCTTGGC
GATTATATTA CCAACGTAGT TGGATTAGGC TTTTGGGTTG ATCCAGATCC TGAACGTCAA
TGGCAAAGCT GGTGGACTAT TTTCTACTGG GGTTGGTGGA TTGCTTGGGC TCCTTTCTGC
GGCATCTTCA TCGCACGAAT CTCTAAAGGC CGTACCATTC GCGAATTCGT CTGCGGTGTG
CTAATCGCTC CAACATTGTT GGCTGCATTC TGGATTTCCA TCTTCGGTAA CACTGCAATG
TTCGTGGAAT TGTTTGGTCC AGGTGGTATC ACAGAAGCCG TCAATGCCGA CACCACTATG
GCGTTGTTCA CAACCATTGA AAGTATGAAT GCTGGTGACA TTGTTACTAT TATCATTTCA
AGTCTATGTA CTTTGATGTT GGTGACTTAC TTTGTAACCT CAGCAGATTC AGCAACCCTA
GTAATTTGTA CCATTGTGTC TTTTGGTGAT GAGCATCCAC CAGCAAAATT CCGAGTATTT
TGGGGCGTTG CCATTGGAAT GGTTGCCGCC GTGCTTCTTT ATGCAGGCGG ATTAAAGGCC
CTACAAACAG CCTCCATTGT CGCCGCTTTT CCTTTCTCTT TCATCGTTAT CATGGCCACG
TATGGCCTGA TTAAATCCCT AAGAGAAGAA TTCCAAGACA AGCCATTCAA AAAACTCAAA
CCTTCAACTG AAAGAGCCTA A
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| Protein sequence | MNDKSYVLPK KGLFSGTHPI LAIGSALLVM AFVLFTVLDP TSANTLYSSA NNFISSNLDW
YYIGLMSFFL FFAVWMSLSK YGDIRLGKDS DRPEFSNYAW FSMLFSAGIG IGILFWSIAE
PIYYLQGNPF ITDAQAGTVA AAQVAMRVAI FHWGLHGWAL FAVIGLALAY FSYRKGLPLS
IRSSLHPIFG DRIYGPIGHA ADLLAVFGTV FGIATSLGLG AQQMNAGLSY LFGFEISTTN
QIILIAILSV IATGSVLTGL NKGIKILSEW NMHLTIVILL LFIVFGPTVY VLGAFVTNLG
DYITNVVGLG FWVDPDPERQ WQSWWTIFYW GWWIAWAPFC GIFIARISKG RTIREFVCGV
LIAPTLLAAF WISIFGNTAM FVELFGPGGI TEAVNADTTM ALFTTIESMN AGDIVTIIIS
SLCTLMLVTY FVTSADSATL VICTIVSFGD EHPPAKFRVF WGVAIGMVAA VLLYAGGLKA
LQTASIVAAF PFSFIVIMAT YGLIKSLREE FQDKPFKKLK PSTERA
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