Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3760 |
Symbol | |
ID | 5368879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4239748 |
End bp | 4241580 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640806143 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001342596 |
Protein GI | 152997761 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.671236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTTGT CTTTGCTAAA GGTTTCATCT TGGAATTGGC GGCAGCGCGA GTGCGGCTAT TTTCATGTTA TTCTTCATCT ATCTGTTTAT CCTGACTTTG AGATTTATAT GCGTATTGTG CGTCGAGCTG TACCTGCTGA ACCAAATGAC TTTCCCTCGA CTATGTCTGC GACTTTACAG CGCGTTTTTT TGTCTCGTGA TGTGGTGTCT GTTGCTCAGC TTGATTACCG CTTACCGCAT TTATTAAGAC CTGATTCTTT ATTTGACCTA ACCACAGCAG CGAAGATATT AGCGGATGCC ATTGTTGCTG GTCAGAAGAT TCTTATCGTT GGTGATTTCG ATGCCGATGG TGCAACCAGT ACAAGTCTTG GGATTCTAGC TTTAGAGGCA ATGGGAGCGA TTGCCCCAGA ATACTTAGTG CCAAACCGTT TTGAATTTGG CTATGGACTT ACACCTGAAA TTGTTGAAGT CGCACAAGAA CGATCACCAG ATGTCTTGGT TACAGTTGAT AACGGCATTG CCAGTATTGA TGGCGTGCTA GCCGCAAAAT CCTATGGTAT GAAAGTGGTT GTGACCGATC ACCATTTGCC CGGTGATACG CTTCCGAACG CCGATGCTAT TGTGAACCCA AATCATCCAA ATTGCGGCTT TCCAAGCAAG AACTTAGCCG GTGTTGGCGT TATTTTTTAC GTGATGTCGG CTTTAAGAGC CGAGTTGAAC AGCCGTAATT GGTTTGCAGA TCAGCACATT CCAGAACCCA AAATGGCAGA TTATTTGGAT TTAGTAGCAC TCGGAACGGT GGCAGATGTT GTGCCTTTGG ATGCTAATAA TCGTATTCTC GTTCAGCAAG GCATCAAGCG TATTCAAGCG GGTTTGGCGC GTCCTGGTAT TCTTGCTTTA TTAGAAGTAG GGCGTCGTGA TTATACTCAA TTGAAAGCAT CTGATTTGGG ATTTGTGGTC GGACCAAGAT TGAACGCGGC AGGTCGTTTA GATGATATGT CGATTGGTAT TGAGTGTTTG CTGGCAGTTC ATCCTCATCA AGCACGCGAT TATGCGCAGC AGTTGGACCA ATTTAATCGA GAGCGCAAAG CCATTGAATC CGATATGAAA GAACAAGCTG AGTTGGTGTT GGAGTCTTTG CTAGATGAAG AGCAAGACAT GCCAAATGGT ATGTGTTTTT ATGACGCGGA TTGGCATCAG GGGGTCATTG GTATTTTGGC TTCGCGGATG AAAGATAAAT GCCATCGTCC AGTGATTGCT TTTGCCAAAG TCGGTGAAAA TGAATTAAAA GGTTCAGCGC GTTCCATCCC CGGCGTTCAT ATTCGTGATG CGTTGGACTT ATTGGCCAAG CGTTATCCGC AGTTGCTTAG TAAATTTGGC GGTCATGCCA TGGCGGCAGG CATGTCGATC AAAGAATCCC ACTATGAAGC GTTTCAATTG GCATTTGATG CCATAATTAC CGAGTGGGTA ACGCCGGAAC AGCTTGAGGC GACACTGCTA ACTGATGGGC CATTAGCACC AGAAGATTTT AGTTTAAGCT TTGCTGAGCA AGTTCGTTTG TCTGGCCCGT GGGGGCAGAT GTTTCCCGAA CCTTGTTTTG ATGGTGTTTT TGATATTTTG CAGCAGCGTA TAGTTGGTGA AAAGCACCTT AAACTTATGG TGCGTGAACC GAGCAGTGGT TTGTTATTGG ATGCAATCAG TTTTTTTGTA GACTTAAATC AATGGCCAAA TGATAAAGTA ACGCAAGCTC GTTTGGTTTA TAAGCTAGAT GTGAATGAGT TTCGCGGTCA GCGTAATCTC CAGTTGTTAG TCGACTATTT AGAACCCGCA TAG
|
Protein sequence | MVLSLLKVSS WNWRQRECGY FHVILHLSVY PDFEIYMRIV RRAVPAEPND FPSTMSATLQ RVFLSRDVVS VAQLDYRLPH LLRPDSLFDL TTAAKILADA IVAGQKILIV GDFDADGATS TSLGILALEA MGAIAPEYLV PNRFEFGYGL TPEIVEVAQE RSPDVLVTVD NGIASIDGVL AAKSYGMKVV VTDHHLPGDT LPNADAIVNP NHPNCGFPSK NLAGVGVIFY VMSALRAELN SRNWFADQHI PEPKMADYLD LVALGTVADV VPLDANNRIL VQQGIKRIQA GLARPGILAL LEVGRRDYTQ LKASDLGFVV GPRLNAAGRL DDMSIGIECL LAVHPHQARD YAQQLDQFNR ERKAIESDMK EQAELVLESL LDEEQDMPNG MCFYDADWHQ GVIGILASRM KDKCHRPVIA FAKVGENELK GSARSIPGVH IRDALDLLAK RYPQLLSKFG GHAMAAGMSI KESHYEAFQL AFDAIITEWV TPEQLEATLL TDGPLAPEDF SLSFAEQVRL SGPWGQMFPE PCFDGVFDIL QQRIVGEKHL KLMVREPSSG LLLDAISFFV DLNQWPNDKV TQARLVYKLD VNEFRGQRNL QLLVDYLEPA
|
| |