| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3560 |
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| Symbol | |
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| ID | 5368914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4019388 |
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| End bp | 4020383 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640805931 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001342397 |
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| Protein GI | 152997562 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.423862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA ACAAAAGCAT TCTTATTACT GGCGGCACCG GCTCCTTCGG TCGCCAGTAT
GTGAAAACAC TCTTGGCCAA CTACCAACCT AAACGACTGG TTATTTATTC TCGTGATGAG
TTGAAGCAAT ACGAAATGCA GCAAGATTTT GATGCTTCTT GCATGCGCTA TTTTATCGGT
GATGTTCGAG ACAAAGATCG TTTAACTCAA GCCATGCGAG ATGTAGATTT TGTCATTCAT
GCTGCGGCAC TAAAACAAGT TCCAGCCGCT GAATACAACC CGATGGAATG TATCAAAACC
AACATTCATG GTGCTGAAAA TGTCATTGCG GCGGCAATTG CTAATAATGT TGAAAAAGTC
ATCGCCTTAT CCACTGACAA AGCGGCTGCG CCAATCAACC TTTACGGCGC GACCAAGCTC
GCTTCTGACA AATTATTTGT CGCCGCCAAC AATATGGTCG GTCAGGGTCG CACGCGTTTC
TCTGTGGTCC GTTACGGCAA TGTAGTTGGA TCACGCGGCT CTGTTGTACC TTTTTTCCAA
AAGCTGGTTG CTGATGGCGC AGAATCCATT CCTATTACCC ACCCAGACAT GACACGTTTT
TGGATCACTT TGCCAATGGG TGTGGATTTT GTATTGAAGA ACTTCCAACG CATGCACGGT
GGTGAGATTT TTATTCCTAA AATCCCTTCT GTGAGGATCT TAGATTTAGC CGCGGCTTAT
GCTCCTAATA TCCCTACCCG TGACGTGGGT ATTCGTCCGG GTGAAAAACT TCATGAAGTT
ATGTGTCCTG CAGATGATTC TTATCATACC TATGAGTTTA AAGACCATTA TGTCATTTCA
CCAAGCATCA AGTTTTATCA AGACGATATG GATTTTGCTC ACAACCGTTT AGGCGAAACG
GGCGAGTTGG TTGAACCAGG ATATGAGTAT CAATCTGGCA GCAACCCACA TTTTTTAAGT
ATTGAAGAGA TTTTGACCTT CGATGACGCA CACTGA
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| Protein sequence | MFNNKSILIT GGTGSFGRQY VKTLLANYQP KRLVIYSRDE LKQYEMQQDF DASCMRYFIG
DVRDKDRLTQ AMRDVDFVIH AAALKQVPAA EYNPMECIKT NIHGAENVIA AAIANNVEKV
IALSTDKAAA PINLYGATKL ASDKLFVAAN NMVGQGRTRF SVVRYGNVVG SRGSVVPFFQ
KLVADGAESI PITHPDMTRF WITLPMGVDF VLKNFQRMHG GEIFIPKIPS VRILDLAAAY
APNIPTRDVG IRPGEKLHEV MCPADDSYHT YEFKDHYVIS PSIKFYQDDM DFAHNRLGET
GELVEPGYEY QSGSNPHFLS IEEILTFDDA H
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