| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3521 |
|---|
| Symbol | |
|---|
| ID | 5367620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3969271 |
|---|
| End bp | 3970161 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805893 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001342359 |
|---|
| Protein GI | 152997524 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.248217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTGA GTAAGCTGCG TTTGGGGCGA ACGGCGGTTA TTCTGGTGCC AATGTTGTGG
TTGGCAGCGT TTTTCTTTAT TCCTTTTTTG GTGGTTTTCA AGATATCTCT AGCCGAAGCC
ATGATTGCGG TGCCGCCGTA TTCACCTTTG CTGCAATGGG ATTCGAGCAA TGCTTATCTC
ACTTTTAAAG TAACGTTTGG CAACTACCTG TATTTGTTTG AATCACGTTT TTATTTGGAT
GCGTATTTAA GCTCGTTAAA AATAGCGGCC ATATCGACGT TTTTTGCTTT GCTAATTGGT
TTTCCGATAG CCTATTTGAT TGCTCGCAGT CGTCCTACTA TGCGGACAAT TTTGCTCGCT
TTGGTTATTT TGCCTTTTTG GACCTCTTTT TTATTGCGTG TTTATGCCTG GATGGCCTTG
CTGAAAAAGA ATGGCTTGGT TAACGATTTT TTATTGGCAA CGGGCATTAT TGATCAGCCA
ATACAAATTC TGCAGACCGA CTTTGCAGTC TATCTTGGCA TTGTTTATAC CTATTTGCCG
TTTATGATTC TGCCCTTGTA CACCACTTTA GAAAAAATGG ATTTAAACCT GCTTGATGCT
GCGCAAGATT TGGGGGCGAA GCCCTATCAG TCCTTCTTCT TGGTGACCTT GCCATTGGCG
AAGCCGGGGA TTATTGCTGG CTGTTTGCTG GTGTTTATTC CAGCGGTTGG GGAATATGTG
ATTCCGGCAT TGTTGGGTGG ATCGGATACC TTGATGATTG GCCGTGTGTT GTGGGATGAG
TTCTTTTTAA ATCGTGATTG GCCTTTGGCA TCTGCCGTGG CGGTGGTCAT GCTGATTGTT
TTGGTTGGGC CAATTATGTT TATGCGAAAC AGCAATAAGG AGGCTGAATG A
|
|---|
| Protein sequence | MMLSKLRLGR TAVILVPMLW LAAFFFIPFL VVFKISLAEA MIAVPPYSPL LQWDSSNAYL
TFKVTFGNYL YLFESRFYLD AYLSSLKIAA ISTFFALLIG FPIAYLIARS RPTMRTILLA
LVILPFWTSF LLRVYAWMAL LKKNGLVNDF LLATGIIDQP IQILQTDFAV YLGIVYTYLP
FMILPLYTTL EKMDLNLLDA AQDLGAKPYQ SFFLVTLPLA KPGIIAGCLL VFIPAVGEYV
IPALLGGSDT LMIGRVLWDE FFLNRDWPLA SAVAVVMLIV LVGPIMFMRN SNKEAE
|
|---|
| |