Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3514 |
Symbol | |
ID | 5368663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 3961677 |
End bp | 3962612 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640805886 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001342352 |
Protein GI | 152997517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.329161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.230148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAATA AGGCTAAGAA GACGGCAATT GCCATAAGCG TGGCAGGTAT TTCAGGACTA ACCCTGGCAG CAGATTGCTC TACGGTTCGC TTTTCCGACG TAGGTTGGAC TGATATTACA GCCACCACAG CGGTAACCAG TGAAATCGTA GAAGGTCTAG GGTACAAATC CAAAACACAA TTGTTATCTG TTCCTGTTAC TTACACTTCG CTAGCAAATG GCGATATAGA TGTCTTTCTT GGCAACTGGA TGCCTACCAT GCAGGCTGAT ATCGAACCTT ACCTAAAAGC TGGCACGGTT GAAGACCTTG GTGCAAACCT AGTCGGTGCC AAATACACAC TAGCGGTTAG TAAAGACGCT TTTGATGCAG GCGTAACGGA CTTTTCAGAC ATAGCAAAAC ATCGCAAAGA ATTTTCTGGT CGCATTTACG GTATAGAGCC GGGCAATGAC GGCAACCGCA TTATCCAAAA TATGATCGAT ACCAACGCCT TTGATCTAGG CAATTTCCAA CTGGTTGAAT CCAGCGAAGC TGGCATGTTA TCGCAAGTTA GCCGTAATAC CCGTCGTAAC AAATGGATCG CTTTCCTAGG CTGGGCACCG CACCCAATGA ATGCCAACTT TAAAATGGAA TACCTTTCAG GTGGTGACGA CTATTTCGGC CCAAATTACG GTGGAGCTGA TGTTCACACC AACGTTCGTA AAGGCTACAT CCAACAATGT CCTAACGTAG GCAAACTTAT CGCCAACCTA AAATTCTCTT TGCCTATGGA AAACCAAATC ATGGGCGCCA TTCTTGATGA AGGCAAAAAA CCTAACATCG CAGCAAAAGA ATGGTTAAAA GCAAACCCTG AAGTTCTGGA TGCTTGGCTT AAAGGTGTCA CAACTCAATC GGGTGATAAC GGCCTAAGCG CTGTGAAATC ACACCTAGGT CTATAA
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Protein sequence | MLNKAKKTAI AISVAGISGL TLAADCSTVR FSDVGWTDIT ATTAVTSEIV EGLGYKSKTQ LLSVPVTYTS LANGDIDVFL GNWMPTMQAD IEPYLKAGTV EDLGANLVGA KYTLAVSKDA FDAGVTDFSD IAKHRKEFSG RIYGIEPGND GNRIIQNMID TNAFDLGNFQ LVESSEAGML SQVSRNTRRN KWIAFLGWAP HPMNANFKME YLSGGDDYFG PNYGGADVHT NVRKGYIQQC PNVGKLIANL KFSLPMENQI MGAILDEGKK PNIAAKEWLK ANPEVLDAWL KGVTTQSGDN GLSAVKSHLG L
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