| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3432 |
|---|
| Symbol | |
|---|
| ID | 5367170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3876102 |
|---|
| End bp | 3876884 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640805804 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_001342270 |
|---|
| Protein GI | 152997435 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGC TTCATCCAGA TCAGCTGCTG AGCTTGACGA TCAGTTTTCT TTTGCCTTTT
TTTCGCATCG GTGCTTTTTT TATGGCGCTG CCTTTATTTG GTAGTCGTCT AGTTAGTCCG
CGAGTACGTA TTGCGTTTTC CTTTCTTGTT GCCATTATTA TTACGCCTGT TATTGATGTC
CCTAATTATG ATCCTATTTC TCCTGCTTAT ATTGTGTTGA TTGCAGAGCA ATTGGTGATT
GGTTTTGTGC TGGGTTTTGT TGTCACTATC TTGTTTCAGC TATTTTCATT GGCGGGGCAG
TTAGCGGCGA TGAAGGCTGG TTTGGGTTTT GCTATGTCTA ATGACCCAGC TAATGGTATT
TCGGTTGCGA CGCTTGGTCA GTATTACTTA TCGATGGTGG CGTTGGCCTT CCTTGGAACG
AATGGTCATT TGGTTATGAT AGAGTATTTA GCCGAAAGTT TTAATTATTG GCCGATTGGT
AGTGGTTTTG ATAGTCAGCG TTATTGGCAG CTAGTGTTAC TTGGTGGGTG GATGTTTGAA
AAGGCATTGC TCATTGTATT GCCTTTAGCA GTTGCTGTAT TGGTAATTAA CTTGTCTTTT
GGTGTGGTTG CTAAGGCATC GCCACAATTG AACGTTTTTG CGCTGGGTTT TCCAATCATA
ATGCTATTTT CTTTGTTCTT TTTCTGGATT ATGTTGGATG ATTTCTTAAA CATCTATTTA
TTGTTTTTCG GAGAAATGAT TGATTGGATG AAGAATACGT GGGGGATTCG TTTAAATGGC
TGA
|
|---|
| Protein sequence | MLELHPDQLL SLTISFLLPF FRIGAFFMAL PLFGSRLVSP RVRIAFSFLV AIIITPVIDV
PNYDPISPAY IVLIAEQLVI GFVLGFVVTI LFQLFSLAGQ LAAMKAGLGF AMSNDPANGI
SVATLGQYYL SMVALAFLGT NGHLVMIEYL AESFNYWPIG SGFDSQRYWQ LVLLGGWMFE
KALLIVLPLA VAVLVINLSF GVVAKASPQL NVFALGFPII MLFSLFFFWI MLDDFLNIYL
LFFGEMIDWM KNTWGIRLNG
|
|---|
| |