Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3372 |
Symbol | |
ID | 5367408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3815990 |
End bp | 3818047 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640805744 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001342210 |
Protein GI | 152997375 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0437762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.412593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTC TCCATCCTCT CCGCAATCTG TGTTTTTTCA CTTCTTTATT GAAGAAGCCA AGAAACTATT TATTAGCTTT GCTATTTGTT TTTCTCCAAG GGTGTGCTCA GCATGGGATG AAAGAGGCAA ATGCTATATC CGATACTGAT CGCCTTGCTA GGTTGTCTGC AAAATCGGGT TGTGCATTTA GCTATGATAG CAGTGAATAT GAAAAGGCAA GGTCACTGTG CCAAGTTTCA GCCGATCTGA ACGATATAGA TTCGCAATTC ACTCTTGCCT TGATGTTTTA TCAAGCTAAG GGAGGAGATA AAAATGTTGA TAAAGCCTTC CATTACATGA CATTAGCTGC AAAAAGTGGT CTTGCTAAAG CCCAGAATTA TTTGGGCTGG TGGTATGAAG ACGGTACAGA GGTGGCGCAG AATTATGCCA CGGCATCCGT TTGGTATTTA AAAGCGGCAA ATCAAGACTA TGATTACGCG CAAAATAATT TGGCGTATTT GTTTGAGGAA GGCTTAGGTG TCCAGCAAGA TTATGAAAAA GCCGCTTATT GGTATTTAAA AGCCGCTTTA AATGGTAATA GCTATGCTCA GGTGAACTTG GGGGATTTGT ACTATAGCGG GTTGGGGGTT GCTCAAGATT TTACAGAAGC AGAAAAATGG TATTTGAAAG CAGCGGAAGA TGACAATGGC GAAGCTGAAT ATAATTTGGG CTACATGTAT GAGATGGGTG AAGGTGTGGC ACAAGATTAT GAAGTGGCAG CAAATTGGTA TCGTAAAGCG GCAGAGCAAG ATTATACCAA TGCTCAAAAT GCTCTGGCGT ATTTGTATTA CAGTGGACAA GGTATAGAAA AGAGCTATCA AGAATCGGTG AATTGGTACT TACGTTCAGC CGAGCTTGGT AATAACTCTG CCCAATATAA CCTTGGTTAC TTTTATGAAG AAGGCATTGG TATCCCACAA AACTTCCCAG AGGCCGCTAA TTGGTATCGC AAAGCGGCCG ATCAAGGACA TATAAAAGCA CAGACGAACT TAGGTTATTT TTTTGATGCA GGGTTAGGTG TAAAACAAAG TTATCTTGAG GCGGCTAATT GGTATCGTAA AGCAGCGGAT CAAGGTTACC CAAGAGCACA GACGAATTTA GGTTATCTTT TTGATGAAGG CCTAGGAGTA GAGCAAAACT ATCTTGAAGC GGCCAACTGG TATCGTAAAG CAGCGGATCA AGGTTACCCA AGAGCACAGA CGAATTTAGG TTATCTTTTT GATGAAGGTC TAGGAGTCGA GCAAAGCTAT CTTGAAGCGG CCAACTGGTA TCGCAAAGCT TCAGATCAGG GTTATTCAAG AGCACAGACG AATTTAGGTT ATCTTTTTGA TGAAGGCTTA GGAGTAGAGC AAAACTATCT TGAAGCGGCT AACTGGTATC GCAAGGCTGC CGATCAGGGC TATTCAATAG CACAGAATAA TTTGGGAGCC TTGTATCAAG CTGGTTATGG CGTAAAACAA GATTCTCAGC GTGCAATTGA GCTATATAAA ATGGCGGCAG AGCAAGGTCT TTCTGATGGT CAGTATAATC TTGCTTACCT GTTGAATGAG GGGATTGGAG TCGATAAAAA CCCAGTTGAA GCAGAAAAGT GGTTTAGAAA ATCTGCGGAA CAAGGGGATA TAGATGCACA GGTAGAGCTT GGTTTATTGT TTTATCGTGG AAGTGGTGTA GATAAAAATT ATCAAGAAGC TTGGAAGTGG TTTCATCAAG CCGCCAAACA AGGCTCAGCA GCGGCTCAAA ACAATATCGG CGCTATGTAT CAAAATGGTT ACGGTGTAAC ACAGGACTAT TCACTTGCAG CGGAATGGTA TCAAAAAGCG GTGAATCAAG ATTTTGCTGG CGCTCAAAAT AATTTAGCTA TTTTGTATGA AGCTGGTTCT GGTGTGCCTA AAAGTGTAAC AAAGGCATTG GTTCTGTATC GAAAAGCCGC TCTTCAGGGA AGCCTATCCG CCAAAGAGAA TTTGAAGCGA TTGTCGAATG GTAATAAAAA AGTGCGAGGG CGATTGCTTT TGAGGTAG
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Protein sequence | MTLLHPLRNL CFFTSLLKKP RNYLLALLFV FLQGCAQHGM KEANAISDTD RLARLSAKSG CAFSYDSSEY EKARSLCQVS ADLNDIDSQF TLALMFYQAK GGDKNVDKAF HYMTLAAKSG LAKAQNYLGW WYEDGTEVAQ NYATASVWYL KAANQDYDYA QNNLAYLFEE GLGVQQDYEK AAYWYLKAAL NGNSYAQVNL GDLYYSGLGV AQDFTEAEKW YLKAAEDDNG EAEYNLGYMY EMGEGVAQDY EVAANWYRKA AEQDYTNAQN ALAYLYYSGQ GIEKSYQESV NWYLRSAELG NNSAQYNLGY FYEEGIGIPQ NFPEAANWYR KAADQGHIKA QTNLGYFFDA GLGVKQSYLE AANWYRKAAD QGYPRAQTNL GYLFDEGLGV EQNYLEAANW YRKAADQGYP RAQTNLGYLF DEGLGVEQSY LEAANWYRKA SDQGYSRAQT NLGYLFDEGL GVEQNYLEAA NWYRKAADQG YSIAQNNLGA LYQAGYGVKQ DSQRAIELYK MAAEQGLSDG QYNLAYLLNE GIGVDKNPVE AEKWFRKSAE QGDIDAQVEL GLLFYRGSGV DKNYQEAWKW FHQAAKQGSA AAQNNIGAMY QNGYGVTQDY SLAAEWYQKA VNQDFAGAQN NLAILYEAGS GVPKSVTKAL VLYRKAALQG SLSAKENLKR LSNGNKKVRG RLLLR
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