Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3121 |
Symbol | |
ID | 5366848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3535633 |
End bp | 3536946 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640805493 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_001341966 |
Protein GI | 152997131 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00404203 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACTCAA CAGTAGAATT GGCATTTTAC GGAGACGATT TCACTGGCTC CACTGATGTA CTTGAAAGTC TAAGCTTACG CGGCAAGAAA ACGATTCTAT TGCTTCGTGT GCCAGAGAAA AAAGATTCGA TTATTTATTC TGATTATGAC TGTGTTGGAG TGGCAGGGAT AAGTCGAAGC AAAGATCCTG TGTGGATGAA AGCTGAATTA CCGAAAGTAT ATCAGTTTCT AAATTCTTTC GATCCTAAAT ATATACATTA TAAAGTCTGT TCAACTTTCG ATTCAAACCT TCATAAAGGT AACTTAGCCG TAGCAACTCA GGTCGGAATT GATGTTTTAT CGCCTAGCTG GACATCCATA GTAGTGGGCA CTCCAAAAAT TAAACGCTAC GTGTGCTTTG GTGAGTTGTT TGCTGATTCA AAAGGGGAGA CTTATCGCAT AGATCGACAC CCTGTGATGA GCTGCCATCC AGCAACGCCA ATGACAGAAG CGAATCTGGT AAAGCATATG CATCAGTTAG GTGAGGTTGA TTGCGCCTCA GTTAATTTGA GTATGTACTC AGACGACTCT GCGGCGACTA AATTACAGCA ATTTATTGCC GAAAATAAAG TGGTTATCTT TGATTCTGTT GATCATTCCT CTCAAGCTAA AGTTGGGGCG CTGATTAATG AGCATTGCCA AGAGGGTCTG CACTTTTCTG TTTCTTCATC TGGTTTCGAA GATGCCGTTT ATAGCCAAAA TAAACTTGTC GAGAATATCA ATATCACGTC TAAGTCTAGG ATTTTGGCGC TATCCGGTAG TTGTTCTTCT ATCACAAGTA GTCAAATTGA TTATGCGTTG AGCCATGGTT TCATTCCCGT TGAACTTGAT ATCGCCAGAT TATTGATGCT TGAAAGCAGG CCTCAATATT TAGATGAGAT CGTTCAAACC TGTATTGATT TACTTAGTAG TAATAAATCG CCTTTGGTGT ATTCCGCTTT GGGTCCTCAG AAAAGCGGTT CAACGACCGC TTCTCAAGAC GGAGATCTAC ATTTTGATGA AATGCTTGGT AGTTTCCTTG GTGCTATTGC TTTAGCTGTT ACAAAGACGG GTCTTATTGA AAGGCTTGCT GTCGCTGGTG GTGATACCTC AGGTTACTGT ATTCAAAGTT TAAACTTGGA TGCTTTGACA TTTATTGCAC CACTTTGTCC AGGTGTTCCT CTATGCCGAG CGCATGCTCA AGACAGTGAT ATAGATGGGT TAGAGCTTGC TCTTAAAGGT GGGCAAATGG GATCTGAAGA TTTCTTTGTT CGATTATGCT CAGGAGGAGA GTAA
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Protein sequence | MNSTVELAFY GDDFTGSTDV LESLSLRGKK TILLLRVPEK KDSIIYSDYD CVGVAGISRS KDPVWMKAEL PKVYQFLNSF DPKYIHYKVC STFDSNLHKG NLAVATQVGI DVLSPSWTSI VVGTPKIKRY VCFGELFADS KGETYRIDRH PVMSCHPATP MTEANLVKHM HQLGEVDCAS VNLSMYSDDS AATKLQQFIA ENKVVIFDSV DHSSQAKVGA LINEHCQEGL HFSVSSSGFE DAVYSQNKLV ENINITSKSR ILALSGSCSS ITSSQIDYAL SHGFIPVELD IARLLMLESR PQYLDEIVQT CIDLLSSNKS PLVYSALGPQ KSGSTTASQD GDLHFDEMLG SFLGAIALAV TKTGLIERLA VAGGDTSGYC IQSLNLDALT FIAPLCPGVP LCRAHAQDSD IDGLELALKG GQMGSEDFFV RLCSGGE
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