Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3115 |
Symbol | |
ID | 5366754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3529885 |
End bp | 3530643 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640805487 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001341960 |
Protein GI | 152997125 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.189997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000781627 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAC AGCACCGCTA TAAAGATATA GTTGATTACT TAAAAGATGC TAATTTAACG ACTGTTGATG AACTTGTTCA GACTCTAAAT GTTTCTCCAG CAACAGTAAG GAGAGATTTA ATCGATCTAG AAAATCAGGG TGTTGTTAGA AGGACTCATG GTGGTGTCAC TTTAAATAAT TTTGTTGCGG CGCAGCTTTC TGTGCAAGAA AAAAACCAAT TATTTAAGGC TGAAAAGGAA AGGATATCTA AAGCTGCAGC CGAGCGAGTT GAGTCTGGGA ATTCTATTAT TTTAGATGCC GGCACGACGA CAATGGAAAT TGCTAAAAAT ATCACACATC TTCCTCTCAG GGTTATCACC CCTGATTTAA GAATTGCGCT GTTTTTAAGT GAATTCAAAC AGATTGAAGT AACCATGTTT GGTGGCGAGA TTGATAATGC CAGCCAGTCT TGCGTTGGAG AGCATGCAAG AAGGCTACTT CAGTCTATTC ATACCGATAT TGCTTTTATA AGTAGTAACT TTTGGAGCTT TGAGCATGGT GTAACTACGC CAAAAGAAGC TAAAACAGCC CTTAAAGCCG ATATGATGAA GTGTGCTGAA GAAAGTATTC TAGTGGCTGA TAGCAGTAAA TATAATAGCT TTTCTTTGTT TAAAGTGGCA GAACTTGATC AATTTTCAGA AATATATACA GACAGTGAAC TCAGCCAAGA GGCCAGAGAA AAGCTGGTGA GTTTTAATGG TAAATTGCAT ATTTTGTGA
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Protein sequence | MKKQHRYKDI VDYLKDANLT TVDELVQTLN VSPATVRRDL IDLENQGVVR RTHGGVTLNN FVAAQLSVQE KNQLFKAEKE RISKAAAERV ESGNSIILDA GTTTMEIAKN ITHLPLRVIT PDLRIALFLS EFKQIEVTMF GGEIDNASQS CVGEHARRLL QSIHTDIAFI SSNFWSFEHG VTTPKEAKTA LKADMMKCAE ESILVADSSK YNSFSLFKVA ELDQFSEIYT DSELSQEARE KLVSFNGKLH IL
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