| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2860 |
|---|
| Symbol | |
|---|
| ID | 5369229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3237506 |
|---|
| End bp | 3240196 |
|---|
| Gene Length | 2691 bp |
|---|
| Protein Length | 896 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805234 |
|---|
| Product | DNA gyrase, A subunit |
|---|
| Protein accession | YP_001341707 |
|---|
| Protein GI | 152996872 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0120458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000549862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAAT TAGCCAAAGA AATTATTCCC GTCAGTATCG AAAATGAACT TAAGGGATCT
TACCTAGATT ACGCCATGAG TGTAATTGTA GGTCGAGCAT TACCTGATGT GCGAGACGGG
TTAAAGCCTG TTCACCGTCG CGTTCTATTT GCGATGAATG AACTTAAAAA TGATTGGAAT
AAACCGTACA AAAAATCGGC GCGTATCGTC GGTGATGTAA TCGGTAAATA TCACCCACAT
GGTGATTCTG CTGTATACGA TACGATTGTT CGTATGGCGC AGCCTTTCTC AATGCGTTAC
ACCTTGGTTG ATGGTCAAGG TAACTTCGGT TCTGTCGATG GTGACAGTGC TGCAGCAATG
CGTTATACCG AAATCCGTAT GGCGAAAATT TCTCACCATC TTTTGATGGA CTTAGAGAAA
GAAACCGTCG ACTTCGTGCC TAACTATGAC GGCACAGAGT TTATGCCAGA AGTATTGCCT
GCGCGAGTTC CTGGGCTGTT AGTGAACGGT TCGGCGGGTA TTGCAGTAGG TATGGCGACT
AATATCCCAC CTCATAATCT TGGTGAGATT ATCGATGGTT GTTTGGCAGT TATTGATAAT
GCTGACATTA CTATTGATGA GCTTATCGAT CATATACCAG GGCCAGACTT CCCTACTGGG
GCGTTTATTA ATGGTCGCGC TGGTATTATT GAAGCTTATA AAACTGGTCG CGGTCGTATT
TACATGCGTG CCCGTCACCA TTTTGAAGAC ATGGAGAAAG GCAATCGCCA GTCCATCGTT
TTCACTGAAA TCCCTTACCA GTTAAACAAA GCGAAAGTGA TTGAAAAAAT CGCTGAGCTA
GTTAAAGAGA AAAAACTGGA AGGCATCAGT GAGCTTCGTG ATGAATCTGA CAAAGACGGT
ATGCGTATCG TTATCGAGTT GCGTCGCGGT GAAAACCCTG ATGTTGTTGT GAATAATATA
TTCACACAAA CTCAGTTGCA GTCAGTGTTT GGTATTAACA TGGTGGCCTT GGTTGATGGT
CGTCCTCAGT TACTTAATAT CAAGCAAATT CTTGAGTGCT TCGTTAAACA CCGTCGTGAA
GTGGTTACTC GTCGTACGAT TTTCGAACTT CGTAAAGCTC GTGAACGCGG CCACATCTTA
GAAGGTTTGG CTGTTTCTCT GGCGAACATT GATCGTGTGA TTGAGCTAAT CCGTACATCG
CCAACGTCAG CTGAAGCAAA AGAAAAAATT GTTAGTGAGT CTTGGGAGCC GGGTGATGTG
GTTGCCATGC TTGAGCGCGC TGGTGCTGAT GCTTGCCGCC CTGATGATCT TGAGGCTGGT
TACGGATTTG TTGATGGTGC ATATCATTTA TCACCTGATC AAGCTCAAGC AATTTTGGAT
TTGCGTCTGC ATCGTTTGAC AGGCTTGGAG CACGATAAGT TACTGGGTGA ATATAAGACT
CTGATTGAGC TTATTGGCGA GTTACTCAAT ATCCTGTCTA ATCCAGATCG TTTGATGGAA
GTGATTCGTG AAGAGCTACA AGAAGTTAAA GAAACTTTTG GTGATGCACG ACGTACTGAA
ATTCTGACGT CTCGCCAAGA TCTGACTATT GCTGATTTGA TTGATGAAGC GCCAATGGTG
GTGACGATTT CGAATACGGG TTATGCGAAA TCCCAGCCAT TAGTTGAGTA TCAAGCTCAG
CGTCGTGGCG GTCGCGGTAA GTCATCTGCG AGCATGAAAG ATGAGGATCA CATCGAGCAT
TTGTTGGTTA CTAGTAGCCA TGACACAATC ATGCTGTTTA GTAACTTTGG TAAAGTTTAC
TGGTTGCGTG TGTTTGAGAT TCCGGTAGCT AGCCGTAGTG CGAAAGGTCG TCCTATTGTT
AATTTGTTAC CTTTGAGAGA AGGTGAGTCT ATATCCGCAC TATTGCCTTT ACCTGTTGTT
GAAGCGGTTG AGGCTGATTC CGAAGCGGAT GATGATGTTT CTGATGATGC CATTGTTGAG
GCTAGTAGCT ATATCTTTAT GGCGACGGCA AATGGAACCG TTAAGAAGAC AGCGATGCAG
CATTTTGCGC GCCCACGTTC GACTGGTTTG ATCGCGCTGA GCTTAGATGA AACCGATGAG
TTGGTTGGTG TATCTGTTAC TAATGGTGAA AACGATATTA TGTTGGTTTC ATCTTCTGGT
AAAACAATCC GCTTTAAAGA ATCTGATGTT CGTGCAATGG GGCGTACTGC AGCAGGTGTG
CGTGGTATTC GTTTGGGTGA AGATGCTAAG GTTGTTTCAC TTATTGTTCC TCAGGATGGT
TCTGCTGTGT TGATGGCTTG TGAAAATGGT TATGGCAAGC GTACTTTGGT AGAAGATTTC
CCTGTGTATG GTCGTGGTGG TCAAGGTGTT ATCGGTATTC AGGTTTCTGA GCGTAATGGC
CCTGTTGTTG GTGCTGCTCA GGTTGATGAA ACTGATGAGA TTATTTTGAT TACTGATCAA
GGTACTTTGG TTCGTACCCG TGTGACGGAA GTGTCATGTC AGGGTAGAAA TACTCAAGGT
GTTACTTTGA TTCGTTTGAC CAACGATGAG CACTTGGTTG GCATTGAGCG TGTTGTTGAA
GATGATGAAG AAGATGTTGA GATCGATGAG GTAGATGATA CTACAGTTGT TGATCAAGCA
CCGAATGATG GTGGCGAATC TCCTGATATC CTTGATAGCG ATACGGAATA G
|
|---|
| Protein sequence | MGELAKEIIP VSIENELKGS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNELKNDWN
KPYKKSARIV GDVIGKYHPH GDSAVYDTIV RMAQPFSMRY TLVDGQGNFG SVDGDSAAAM
RYTEIRMAKI SHHLLMDLEK ETVDFVPNYD GTEFMPEVLP ARVPGLLVNG SAGIAVGMAT
NIPPHNLGEI IDGCLAVIDN ADITIDELID HIPGPDFPTG AFINGRAGII EAYKTGRGRI
YMRARHHFED MEKGNRQSIV FTEIPYQLNK AKVIEKIAEL VKEKKLEGIS ELRDESDKDG
MRIVIELRRG ENPDVVVNNI FTQTQLQSVF GINMVALVDG RPQLLNIKQI LECFVKHRRE
VVTRRTIFEL RKARERGHIL EGLAVSLANI DRVIELIRTS PTSAEAKEKI VSESWEPGDV
VAMLERAGAD ACRPDDLEAG YGFVDGAYHL SPDQAQAILD LRLHRLTGLE HDKLLGEYKT
LIELIGELLN ILSNPDRLME VIREELQEVK ETFGDARRTE ILTSRQDLTI ADLIDEAPMV
VTISNTGYAK SQPLVEYQAQ RRGGRGKSSA SMKDEDHIEH LLVTSSHDTI MLFSNFGKVY
WLRVFEIPVA SRSAKGRPIV NLLPLREGES ISALLPLPVV EAVEADSEAD DDVSDDAIVE
ASSYIFMATA NGTVKKTAMQ HFARPRSTGL IALSLDETDE LVGVSVTNGE NDIMLVSSSG
KTIRFKESDV RAMGRTAAGV RGIRLGEDAK VVSLIVPQDG SAVLMACENG YGKRTLVEDF
PVYGRGGQGV IGIQVSERNG PVVGAAQVDE TDEIILITDQ GTLVRTRVTE VSCQGRNTQG
VTLIRLTNDE HLVGIERVVE DDEEDVEIDE VDDTTVVDQA PNDGGESPDI LDSDTE
|
|---|
| |