Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2802 |
Symbol | sdhA |
ID | 5365982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3175683 |
End bp | 3177455 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640805176 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001341649 |
Protein GI | 152996814 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.35465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.79012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA TTCGTACTAT TTCTTTTGAT GCCATTGTTA TCGGTGGTGG CGGCGCAGGT ATGCGTGCAG CACTTCAGTT AACTGAATCT GGTTTGAATA CCGCGTGTGT TACCAAAGTA TTCCCGACTC GTTCTCACAC TGTGTCTGCG CAAGGTGGTA TTACCTGTGC GATCGCAAGT GATGATCCAA ATGATGATTG GCGCTGGCAT ATGTATGACA CTGTAAAAGG GTCAGATTAC ATTGGCGACC AAGATGCTAT CGAATACATG TGTTCCGTAG GTCCTCAGGC TGTATTTGAG CTTGAGCACA TGGGGCTACC GTTTTCTCGT ACTGAGCAAG GTCGTATTTA TCAGCGTCCT TTTGGTGGTC AGTCTAAAGA TTTTGGTAAA GGCGGTCAGG CTGCTCGTAC TTGTGCGGCT GCTGACCGTA CTGGTCATGC CTTGTTGCAT ACGCTTTATC AAGGCAACCT AAAAGGCGGT ACTACATTCT TTAATGAGTG GTATGCGACA GATCTTGTTA AAAATAACGA AGATGCTGTT GTTGGTGTTA TTGCGATTTG TATCGAAACT GGCGAAACAG TTTACTTGAA AGCAAAAGCA ACTGTTATTG CAACTGGTGG TGCTGGTCGT ATTTATCAGT CTACTACTAA TGCTCATATC AATACTGGTG ACGGTGTGGG TATGGCGCTT CGTGCTGGTT TCCCAATGCA AGATATGGAA ATGTGGCAGT TCCACCCAAC CGGTATCTAT GGTGCTGGTA CTCTAGTTAC TGAAGGTTGC CGTGGTGAAG GTGGTTACCT AATCAATAAA GACGGCGAGC GTTTCATGGA GCGTTATGCG CCAAACGCTA AAGACCTTGC TGGTCGTGAC GTTGTTGCAC GTTCAATGAT TCTTGAAATC CTAGAAGGTC GTGGATGTGG TCCAGATGGG GATCACGTAT TGCTAAAATT AGATCACTTG GGTGAAGAGA CCTTGAATAA GCGTCTTCCA GGTATTCTTG AGCTTTCTCG TACTTTTGCT CACGTTGATC CAGTTAAAGA GCCAATTCCA GTTATCCCTA CTTGTCATTA TATGATGGGG GGTATTCCAA CAAATATCGG CGGGCAAGCA ATTAAAGTTA ACGAAGCGGG CGAAGATACC ATTATTGATG GTCTTTACGC GTGTGGAGAG GCGGCTTGTG TATCTGTGCA CGGTGCAAAC CGTCTTGGTG GTAACTCGTT GCTTGATTTG GTTGTATTTG GGCGCGCTGT TGGTATTCAA GTTAAAAAAT CTTTGGATGA AGGTTTTGAA TCGCTTGATG CTGACGATAC AAATGTTGAA AAAGCGTTGG CTCGTCTAAA TCGCTTAAAT AGTTCGACTG GCGGTGAAAG TGTTGCTGCA GTTCGTGCTG ACCTTCAGCG TGTAATGCAA CTATATTTCG GTGTGTTCCG TGATGGCGAA GCAATGCAGA AAGGCTTGGA GCAGTTAAAA GAGATTCGTA CTCGAGTTGA AAATCTTCAC CTTGAAGATA AGAGCCAGGC ATTCAATACA GCTCGTATTG AAGCTCTTGA GCTTGAGAAC TTATTAGAGG TTGCTGAAGC GACTGCCATT CCTGCGGAAT TCCGTAAGGA AAGTCGTGGT GCTCATGCGC GTAATGACTT TACAGAGCGT GATGATGAGA ACTGGTTGAA GCATTCTTTA TTCCATCCAG TAGGTAAAGC GGTAACTAAG CGTGATGTAA ACTTTGCGCC GAAAACTATG GAAGCTTTCC CACCTAAGGC TCGTTCATAT TAA
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Protein sequence | MANIRTISFD AIVIGGGGAG MRAALQLTES GLNTACVTKV FPTRSHTVSA QGGITCAIAS DDPNDDWRWH MYDTVKGSDY IGDQDAIEYM CSVGPQAVFE LEHMGLPFSR TEQGRIYQRP FGGQSKDFGK GGQAARTCAA ADRTGHALLH TLYQGNLKGG TTFFNEWYAT DLVKNNEDAV VGVIAICIET GETVYLKAKA TVIATGGAGR IYQSTTNAHI NTGDGVGMAL RAGFPMQDME MWQFHPTGIY GAGTLVTEGC RGEGGYLINK DGERFMERYA PNAKDLAGRD VVARSMILEI LEGRGCGPDG DHVLLKLDHL GEETLNKRLP GILELSRTFA HVDPVKEPIP VIPTCHYMMG GIPTNIGGQA IKVNEAGEDT IIDGLYACGE AACVSVHGAN RLGGNSLLDL VVFGRAVGIQ VKKSLDEGFE SLDADDTNVE KALARLNRLN SSTGGESVAA VRADLQRVMQ LYFGVFRDGE AMQKGLEQLK EIRTRVENLH LEDKSQAFNT ARIEALELEN LLEVAEATAI PAEFRKESRG AHARNDFTER DDENWLKHSL FHPVGKAVTK RDVNFAPKTM EAFPPKARSY
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