Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2638 |
Symbol | |
ID | 5366993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2982440 |
End bp | 2982997 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640805012 |
Product | oligoribonuclease |
Protein accession | YP_001341486 |
Protein GI | 152996651 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0115664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000947663 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTAA ATGAAGAGAA TTTAGTGTGG ATCGATCTTG AAATGACAGG TTTGGATCCA GAAACCGATA CTATTATTGA GATTGCCACG GTCGTAACGG ATAAACATTT GAATGTGTTG GCTAAAGGGC CGAGCCTTGC AATTCATCAA GAAAAAGCAG TGATGGATGC GATGGATGAA TGGTGTACGC AGCATCATGG TGATTCTGGA TTAACAGCTA GGGTATTGTC TTCAACTATT AGTATGGAGC AAGCAGAAGA AGAGACTATA AAGTTTTTGG CTCAATATGT TCCGGCTGGT AAGTCGCCTA TTTGTGGTAA CAGTGTTGGG CAAGATCGCC GTTTTTTATA TCGCTATATG CCCAAGTTGG AAGTGTTCTT TCATTACCGA TATTTGGATG TTAGTACTGT GAAGGAGTTG GCGAAGCGTT GGAAGCCAGA AGCGTTAGAA GGTTTTTCTA AATCAGGTTC GCATCTGGCA ATGGATGATA TTTTGGAGTC TATTGGTGAG TTGAAGCATT ATCGTAAAAC CATGTTTGGT TTAGATGATA AGGCTTAA
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Protein sequence | MSLNEENLVW IDLEMTGLDP ETDTIIEIAT VVTDKHLNVL AKGPSLAIHQ EKAVMDAMDE WCTQHHGDSG LTARVLSSTI SMEQAEEETI KFLAQYVPAG KSPICGNSVG QDRRFLYRYM PKLEVFFHYR YLDVSTVKEL AKRWKPEALE GFSKSGSHLA MDDILESIGE LKHYRKTMFG LDDKA
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