| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2613 |
|---|
| Symbol | |
|---|
| ID | 5365482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2954638 |
|---|
| End bp | 2956059 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640804986 |
|---|
| Product | UDP-N-acetylmuramate--alanine ligase |
|---|
| Protein accession | YP_001341461 |
|---|
| Protein GI | 152996626 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00649562 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000596507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATA TTAAAGCTCA GTACGATATT CCAACGATGC GCCGTATTCA AAACATCCAC
TTTATAGGTA TTGGTGGTGT TGGTATGTGT GGTATTGCAG AGGTGTTGCA TAACCAAGGT
TATCAAGTTT CAGGGTCTGA TCTTAAGGCG TCATCTACAA CAGATCGTTT AGAAGAATTG
GGTATTAAGA TCTATCTAGG GCATTTAGAA GAAAACGTTT ATAACGCCCA TGTGATAGTG
GTATCTACCG CAATAAATGA GCAAAACCCA GAAATTATCT GGGGTAAAGA GCATAGAATT
CCGATTGTTC GAAGAGCAGA AATGCTGGCT GAATTAATGC GTTATCGCCA TGGTATTGCT
GTTGCTGGGA CGCATGGTAA AACAACGACT ACGAGCTTGA TGGCTTCTAT ATTAGCGGCT
ACTGGTGAGG CGCCAACATT TGTTATTGGT GGGCGTTTAA CCAGTGCTGG AGCAAATGCA
CAATTGGGTA GCAGTGCTTA TCTTGTTGCT GAGGCAGATG AAAGTGATGC GTCATTCCTG
CATTTGCAAC CACAGACGGT GATAGTCACT AATATCGATG AAGATCACAT GGATACCTAT
GATGGTGACT TTGAAAAAGT TAAACATACC TTTATTGAGT TCGTACATAA CCTGCCTTTT
TATGGTTTAG CTGTGTTATG TGTTGATGAT GAGAATGTTC GTGAAATTCT GCCTACTTTG
AGTCGCCCAG TATTAACATA CGGTATCGAT CAAGAAGCGG ATTTTTATGC GACAGAGATA
GTGCAAACAG GCCGTTATTG TGAGTTTTTG GCGCATCGCC CTGAAGGTGA GCCGCTGAAA
ATTCGCTTAC CAATGCCGGG TCGTCACAAC GTACTTAATG CGCTTGCCAC AATTGCGGTA
GCGACTGATT TGGGTGTTGA TGCCTCTGCT ATTCAAGCCG GCCTAATGGG CTTTGAAGGT
GTGGGACGTC GTTTCCAAGA GCAAAAGCCT TTGGCGTTGC CAAATGGTTC GAATGTCATG
TTTGTTGATG ACTATGGTCA TCACCCAAGT GAAGTATTGG CAACTATTAA GGCGATCCGT
GCAGGTTGGC CTGAGAAGCG CTTGGTCATG GTTTATCAGC CGCATCGTTA TACTCGAACA
CGTGATTTGT ATGAAGATTT TGTGCGAGTT TTGTCTCAAG TGGACGTTTT GCTCTTATTG
GATGTTTACT CCGCTGGTGA GGCGCCTATC AATGGTGCTG ACAGTCGCTC TTTATGTGGC
AGTATTCGTC AGCGCGGCAA TGTTGACCCA ATTCATGTTG GTAGTGAGGC AGATTTACGC
TCTATTTTGA GTAATGTTTT GCGTGAAGGC GATTTATTGA TTACGCAAGG TGCTGGTGAT
ATCGGTATGG TTTCTAAAAA CTTATCTGTA AGCGGAATTT AA
|
|---|
| Protein sequence | MIDIKAQYDI PTMRRIQNIH FIGIGGVGMC GIAEVLHNQG YQVSGSDLKA SSTTDRLEEL
GIKIYLGHLE ENVYNAHVIV VSTAINEQNP EIIWGKEHRI PIVRRAEMLA ELMRYRHGIA
VAGTHGKTTT TSLMASILAA TGEAPTFVIG GRLTSAGANA QLGSSAYLVA EADESDASFL
HLQPQTVIVT NIDEDHMDTY DGDFEKVKHT FIEFVHNLPF YGLAVLCVDD ENVREILPTL
SRPVLTYGID QEADFYATEI VQTGRYCEFL AHRPEGEPLK IRLPMPGRHN VLNALATIAV
ATDLGVDASA IQAGLMGFEG VGRRFQEQKP LALPNGSNVM FVDDYGHHPS EVLATIKAIR
AGWPEKRLVM VYQPHRYTRT RDLYEDFVRV LSQVDVLLLL DVYSAGEAPI NGADSRSLCG
SIRQRGNVDP IHVGSEADLR SILSNVLREG DLLITQGAGD IGMVSKNLSV SGI
|
|---|
| |