Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2542 |
Symbol | |
ID | 5367506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2844393 |
End bp | 2845037 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640804905 |
Product | HAD family hydrolase |
Protein accession | YP_001341396 |
Protein GI | 152996561 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.214098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTACT CTTACAAAGC AATAATCTTT GATTGCGATG GTGTCATTGT CGACACAGAA AACATATCCA ATACTATTTT AAAATCCATG CTAAACGAGT GCGGCCTAGA ACTCGACGAT GAGACTTTGC ACGCAAAATT CACCGGATTC ACCAACAAAG AAAACCTCAT CAATGCCGAA AAATTACTTG GCAAGCCATT ACCAGCGAAC TTTGATGAAG ATTATAGACA ACGCTTTCAT GCCATTATCG AAGCGGATTT AGAACCTATT TCTGGTGTGT TAGATTTACT CAGTAAAATA ACAACCCCCA TTGCCATGGC GACCAATGCA CGACGTCAAG AAATGAACTT CAAATTAGAC AAAATTCAAT TGTCTGAGCG ATTCGCTACC CGTTTCTGTG TCGAAGATGT GGAAAATGGC AAACCAGCGC CAGATCTTTA CCTAAAAGCA GCTCAAGCAC TAAATGTCGA TCCAAAAGAT TGCTTAGTAA TTGAAGATTC CATTGCAGGA ATTACGGCAG GACGAGCTGC TGGAATGAGA GTGCTCGCTT TTAGCGAAAC CCTTGATGAG AAAATGCAAT CTGCCGCAGG TGCGACTGAA TGCTTTAAAA CCATGAAAGA ACTAGAAGGC TTGTTAGGTC TTTAA
|
Protein sequence | MTYSYKAIIF DCDGVIVDTE NISNTILKSM LNECGLELDD ETLHAKFTGF TNKENLINAE KLLGKPLPAN FDEDYRQRFH AIIEADLEPI SGVLDLLSKI TTPIAMATNA RRQEMNFKLD KIQLSERFAT RFCVEDVENG KPAPDLYLKA AQALNVDPKD CLVIEDSIAG ITAGRAAGMR VLAFSETLDE KMQSAAGATE CFKTMKELEG LLGL
|
| |