Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2418 |
Symbol | |
ID | 5366628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2725212 |
End bp | 2726687 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640804783 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_001341275 |
Protein GI | 152996440 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.969925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0433381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGT CTTTACAATT AAAGCTTGGT CAACAGCTGA CTATGACGCC ACAACTGCAA CAGGCTATTC GCTTGCTGCA GCTTTCTACG TTGGATTTAA AACAAGAAAT TCATGAATTC CTTGAATCGA ATCCCCTGCT TGAGCTTGAC GACGACGAAC AAATTCATTA CGACATCCCA GCAAGCATTG AATCAAAAAG CGCTGCCGAT ACAACAGTCG ACAACAACAG CGAAGAACCA CGCGTAGAAT CTGAGTGGAC TGAAAGCATC CCTGAAGAAC TATCCATAGA TAGTAACTGG GATGATACCT ATCAAAGTTC CGCCGCTGTC AGCGATAGCA ACAGCTATGA AGGCGATAGC GACTTCGAAA GCCGTAACGC ACCAGCAGAA AGCATCCAAG ACCATCTTAT ATGGCAATTA AATTTAACCC ACATGTCAGA TCGCGACATT GAAATCGCTT ACGCCATCAT TGAATGCGTG CAGCCAGACG GCTATCTAAG CATTTCGCCT GATGATATTT GCGAATCTCT AAGTATTGAA TTAGAAGACT TAGAATTAGA TGAAGTCATT GCAGTGCAAC ATAGATTGCA ACGCTTTGAC CCTGTTGGTG TGTGCTCAAT CGATCTACGT GACTGCCTTC TTGTACAACT AGAAGCATTC CAAAGCCACC CGCTGTATAA GAGCACATAC AATCTTATTG ATCATTATCT ACCATTATTA GGTAATCGAG ATTTTGCTCA GTTGAGCCGT AAGACAAAAC TAAAAGACGA AGCCCTAAAA GAAGTCGTCG ATTTGATTCA ACAGCTCAAC CCACGCCCAG GCTCAGTTAT CGACGCTGAC GACACGGATT ACGTTATTCC AGATGTCACA GTGAAAAAAC GCCATGATGT ATGGCAAGTG GAGCTAAACA ACGATGCTTT GCCGCCCATC AAAATCAATG AGACCTACTC AGCGATGGTT AGCACCGCAG CAGCAACAGC AGAAGACGTG ACTTACATAA AAACCTCTCT TCAAGAAGCA AAATGGTTCA TGAAGAGCCT ACAGAGCCGC AACGAAACTT TATTAAAAGT GGCGAGCTGT ATTGTAAGTC GACAAATTGA TTTCTTCGAA TTAGGCGAAG AAGCCATGAA ACCCATGGTT CTTCACGACG TTGCAGAAGA AGTAGGCATG CATGAATCAA CTATTTCCAG GGTAACAACA CAGAAATACA TGCATACGCC GAAAGGCATC TTTGAGCTGA AATACTTTTT CTCCAGCCAT GTAAACACTG CCTCTGGCGG AGAATGTTCT TCTACCGCAA TACGAGCTAT GATTAAAAAG CTTGTGTCAG ATGAACCGGC GAAAAAACCG TTAAGCGATA ACAAGCTAGC TGCTATTTTA GCAGACCAAG GCATACAGGT TGCTCGACGC ACTGTAGCCA AATATCGAGA GGCGATGAAC ATCCCTCCTT CCAATGAACG AAAACGACTG ATCTAA
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Protein sequence | MKQSLQLKLG QQLTMTPQLQ QAIRLLQLST LDLKQEIHEF LESNPLLELD DDEQIHYDIP ASIESKSAAD TTVDNNSEEP RVESEWTESI PEELSIDSNW DDTYQSSAAV SDSNSYEGDS DFESRNAPAE SIQDHLIWQL NLTHMSDRDI EIAYAIIECV QPDGYLSISP DDICESLSIE LEDLELDEVI AVQHRLQRFD PVGVCSIDLR DCLLVQLEAF QSHPLYKSTY NLIDHYLPLL GNRDFAQLSR KTKLKDEALK EVVDLIQQLN PRPGSVIDAD DTDYVIPDVT VKKRHDVWQV ELNNDALPPI KINETYSAMV STAAATAEDV TYIKTSLQEA KWFMKSLQSR NETLLKVASC IVSRQIDFFE LGEEAMKPMV LHDVAEEVGM HESTISRVTT QKYMHTPKGI FELKYFFSSH VNTASGGECS STAIRAMIKK LVSDEPAKKP LSDNKLAAIL ADQGIQVARR TVAKYREAMN IPPSNERKRL I
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