Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_2378 |
Symbol | |
ID | 5368116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2686636 |
End bp | 2688534 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640804743 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001341235 |
Protein GI | 152996400 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.856742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG CTGATACTCA GCCTACATTT GATTCGTTGG GTCTAATCGC CCCTGTTCTT AAAGCGGTTG CTGACCTAGG TTACGAGCAA CCATCTGCTA TCCAAGCGCA AAGTATTCCA TATCTATTAG AAGGTCGAGA CCTTTTGGGG CAAGCGCAGA CGGGTACTGG TAAGACAGCA GCGTTCGCGC TACCGTTACT GTCTCGCATT GATGTTACAG ATAAAACGAC ACAATTACTT GTACTGGCTC CAACCCGTGA ACTTGCTATT CAAGTTTCTG AAGCATTTCA AAGTTATGCT CGTAATCTTC CAGATTTTCA TGTTCTGCCA ATTTACGGCG GCATGTCATA CGACACTCAA CTTCGCCAAC TAAAACGCGG AGTTCAAGTA GTTGTTGGTA CACCTGGTCG TGTTATGGAT CACATTCGTC GTAAAACATT GAAACTAGAT GGTATTAAAG CCCTAGTTCT TGATGAAGCG GATGAGATGT TACGTATGGG ATTCATCGAT GATGTCGAAT GGATTCTTGA GCAAACACCA CCAACTCGTC AAATCGCTTT GTTCTCTGCG ACTATGCCTG CCGTGATTCG TCAGGTTGCT AATCGTCATT TGAACAATCC AAAAGAAGTT AAGATTGTTA CTAAAACTTC TACGGCAATG ACGATTACGC AAAAATACTG GCCTGTAAGT GGTCTACATA AGTTAGACGC TTTGACACGT ATTCTTGAAA TGAACGAACA TGATGGCATG ATCATCTTCG TTCGTACTAA GGCCGCAACT GTTGAGTTGG CTGAAAAGCT AACGGCTCGT GGTCACGCTT GTGAAGCCTT GAATGGTGAT ATCAGCCAGA ATTTACGTGA ACGCACAGTT GATCGTATTA AGAAAGGTCA AATTGACATT CTTGTTGCAA CAGACGTTGT GGCACGTGGT TTGGACGTAG AACGTGTAAG TCACGTTGTT AACTATGATA TCCCATACGA TACTGAGTCT TATGTTCACC GTATCGGTCG TACTGGTCGT GCTGGTCGTT CAGGTACAGC GATTTTGTTC GTTGCTCATC GTGAGCGTCG TATGTTGCAA GCTATTGAGC GAGCAACTCG TCAGCCAATC GAAAGTATGA CATTGCCAAC TGCTTCAGAT ATTAATGCGC ACCGTGTTAA TCGCTTCAAG CAGAGCATTA CGGACGCAAT GGATAACGAA GACTTAGATT TCTTCCTAGA GCTTGTTCAA AGCTACCAGA AAGAAAATGA AGTTGATCCA TTGAAAATGG CGGCTGCTTT GGCTCATATG GCTCAAGGTA AAACACCACT ATTATTGTCT GAAATGGAAG TTCGTCAAGA ACGTCGAGAG CGTCGTGAAG ATCGCGATAG CCCTCGTGGT GAGCGCGGAG ATCGTGGTGA CCGTGGAGAT CGTGCGCCTC GCGAACGTAA GGTTCGTCCG GTTACGGCAG AAGCTATGCC ATTAAAGGAT GATCCTGATA CGTCTATGAC GCGTTATGTT GTTCAAGTTG GCTACAGCGA CGGCGTTAAA CCTGGCAACA TCGTTGGTGC AATTGCTAAT GAAGCTGATA TTGAAAGCCG CTATATAGGC CATATCGAAA TTTATGAAGA TTTCGCTACA GTCGATTTGC CTTCTAACCT AAGTGCAGAT GCATTAGGTA AATTGGGTAA AACACGTATT TGTGGTCAGC GTACTGACAT TGCTAAGCTA GAGAATGCGG ATGAGTTGAA TAAGCGTGCT GCAGCACCTT CTACTCGTAA GCGTCCAGCT AGTGGTGATC GTCGCCCATC TAATGGTGGA GAGCGTCGTC GTCCAAGCGC TGGTGCCGGT GGTGGTCGTG ACCGCGATGC AAATCGCAGT GGCGAACGTC GTCCAAGAGC ACCACGTAAA AACGCTTAA
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Protein sequence | MSDADTQPTF DSLGLIAPVL KAVADLGYEQ PSAIQAQSIP YLLEGRDLLG QAQTGTGKTA AFALPLLSRI DVTDKTTQLL VLAPTRELAI QVSEAFQSYA RNLPDFHVLP IYGGMSYDTQ LRQLKRGVQV VVGTPGRVMD HIRRKTLKLD GIKALVLDEA DEMLRMGFID DVEWILEQTP PTRQIALFSA TMPAVIRQVA NRHLNNPKEV KIVTKTSTAM TITQKYWPVS GLHKLDALTR ILEMNEHDGM IIFVRTKAAT VELAEKLTAR GHACEALNGD ISQNLRERTV DRIKKGQIDI LVATDVVARG LDVERVSHVV NYDIPYDTES YVHRIGRTGR AGRSGTAILF VAHRERRMLQ AIERATRQPI ESMTLPTASD INAHRVNRFK QSITDAMDNE DLDFFLELVQ SYQKENEVDP LKMAAALAHM AQGKTPLLLS EMEVRQERRE RREDRDSPRG ERGDRGDRGD RAPRERKVRP VTAEAMPLKD DPDTSMTRYV VQVGYSDGVK PGNIVGAIAN EADIESRYIG HIEIYEDFAT VDLPSNLSAD ALGKLGKTRI CGQRTDIAKL ENADELNKRA AAPSTRKRPA SGDRRPSNGG ERRRPSAGAG GGRDRDANRS GERRPRAPRK NA
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