| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1895 |
|---|
| Symbol | |
|---|
| ID | 5365332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2150083 |
|---|
| End bp | 2151435 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640804242 |
|---|
| Product | glutamate dehydrogenase |
|---|
| Protein accession | YP_001340754 |
|---|
| Protein GI | 152995919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATG TTCATCAAAC CATTTCTGAT TTGAAGCGTA CTAGTCCTGC TCAATCTGAG
TTTTATCAAG CCGTGGAAGA GGTGCTGGAT TCACTTGCGC CCGTATTGGA AGGAAATGAT
CGTTATCAAA AGCAAGCAAT AATACAACGT ATTGTTGAGC CTGAGCGTCA AATTATGTTT
CGTGTTCCTT GGGTAGATGA CAAGGGTAAT ATTCAAGTGA ATAAAGGGTA TCGTGTTGAG
TTTAACTCTG CTCTTGGCCC TTATAAAGGC GGTTTACGCT TTCATCCTAG TGTAAATGCC
AGCATCATTA AATTTTTAGG CTTTGAGCAA ATTTTTAAAA ATGCACTAAC GGGATTACCT
ATTGGTGGCG GTAAAGGTGG CGCTAACTTT GATCCTAAAG GCCGTTCTGA TGGCGAGATT
ATGCGTTTTT GCCAGTCATT TATGACCGAG TTATACAGAC ATATTGGCCC AACAACGGAT
GTTCCTGCGG GTGATATAGG TGTTGGTGCA CGAGAAATTG GTTATATGTT TGGACAATAT
AAACGTTTGA CTGGCCGCTA CGAAGGGGTA TTGACGGGGA AAAGTTTGCT TTGGGGCGGT
TCATTAGTTC GTAAGGAAGC AACTGGTTAC GGTGCAGTGT ATTTTGCTCA GTATATGCTA
GAGGCCCGCG GAGACCTTTT AAAAGGCAAA AAATGTCTTA TTTCAGGTGC TGGTAATGTA
GCTATTTACA CGATTGAAAA GCTATATCAG CTTGGTGCGA TACCTGTTAG TTGTTCAGAT
TCACGTGGCA CTATTTATCA TGACAAAGGC ATCGATCTTG ATTTATTAAA AGAATTGAAA
GAAGTGCGTA GTGTCAGCCT AGTAGAGTAT TTGCAAAAGC ACAGTGATGC TCAATATATT
CCAGCGTCTG ATTATCCAGC GGACGGCCAT GCTGTATGGC GCTTTAAAGC CGATGCAGCT
TTTCCTTGTG CGACGCAGAA TGAACTTACT TTAGAAGACG CTCAGGCATT ATTGTCCAAT
GGGTGTGTTG TCGTGAGCGA GGGGGCGAAT ATGCCGTCCA CACAAACGGC AGCCGATGCT
TTTATTGATG CGAAAATTGC TTATGGTCCA GGTAAAGCTG CGAATGCTGG TGGTGTAGCG
ACTAGTCAGT TAGAAATGGC GCAAAATGCA AGCATGCAAA ATTGGACGTT CGAGCAGGTA
GATGAAAAGT TGAAAGTAAT TATGAAAAAT ATTTTCAATG CAGCCAATGA TACCGCTACA
GAATTTGGTC AACCTGGAAA CCTTGTTTTA GGTGCTAATA TTGCCAGTTT TAGGCGTGTA
GCTGAGGCCA TGATTGAGCA GGGAATCGTA TAA
|
|---|
| Protein sequence | MTYVHQTISD LKRTSPAQSE FYQAVEEVLD SLAPVLEGND RYQKQAIIQR IVEPERQIMF
RVPWVDDKGN IQVNKGYRVE FNSALGPYKG GLRFHPSVNA SIIKFLGFEQ IFKNALTGLP
IGGGKGGANF DPKGRSDGEI MRFCQSFMTE LYRHIGPTTD VPAGDIGVGA REIGYMFGQY
KRLTGRYEGV LTGKSLLWGG SLVRKEATGY GAVYFAQYML EARGDLLKGK KCLISGAGNV
AIYTIEKLYQ LGAIPVSCSD SRGTIYHDKG IDLDLLKELK EVRSVSLVEY LQKHSDAQYI
PASDYPADGH AVWRFKADAA FPCATQNELT LEDAQALLSN GCVVVSEGAN MPSTQTAADA
FIDAKIAYGP GKAANAGGVA TSQLEMAQNA SMQNWTFEQV DEKLKVIMKN IFNAANDTAT
EFGQPGNLVL GANIASFRRV AEAMIEQGIV
|
|---|
| |