Gene Mmwyl1_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_1889 
Symbol 
ID5366676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2142552 
End bp2144696 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content33% 
IMG OID640804236 
Productdiguanylate cyclase 
Protein accessionYP_001340748 
Protein GI152995913 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.838759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TATTAATTAC ATTGCTTTTT TTATTCCTAT ATTCAGTCGG GTCTATAGCG 
AAACCTTTGG ATTTAACGAA AGAGGAAAAG AGGTTTATTA AAGATAACCC AGTAGTGAGC
ATCGGTATGA TGCCTGATTT TACTCCTTTC TCATACTATA TCGAAGGTGA GTTGGTTGGG
TTTGAGCATG ATTTATTGAC TTTGATATCG CAGAAAACTG GCCTGAAATT TGAAAAACAT
ATAGATAAAT GGACAACTAT TTATAATTCG TTTAAAAACA AAGAAATCGA TATGATAAGT
AGTATTTCTT ATAAAAAATA CAGAGAGCCC TTTACTATAT TTACTAGTCC ATATTACAAC
ATACCTATTA TGATTTTTGT TAAAGATGAT TTTGGTGAAT ATAATGGGTT AAAAAGCCTG
ACAGGAAAAA AAGTCGGTGT GTTGAAGGAC GTATTTTACA TTAAAGAACT TGAAGAGTTG
GGTTCAATGA ATCTGATTTT TTATGATAGC TATGATGATT TAACTAAGGA TTTAGTGTTT
GGTAAAATTG ATGCGTTAAT GCAAAATCTC CCGAATATAA ATCATCTGAT TAAAAAGAAT
TTATATAATA ATATAAAGTT GGCAAGTGAG CTTGTTTTAC CAAATACTAA CAGAGAGGAC
TTAAGGTTTG GAATACAGCC GGAGAAAAGC CTTTTAATTT CTATCCTACA AAAGTCTCTT
ATCTCTATAT CAAAAAGAGA AATGGAGGAG TTGAGTGATA AATGGATTGG CTCCATTAAA
GAGTATCCAG GTGGACATAT TGATCTAGAT GATACCGAAA AAGCTTACAT TAATACCCAT
ACTATTAAAT ATTGTATCAA CCCAAGTGGT TTGCCCTTCG AAGGACTGAA TGAAGACGGT
GAACATGTTG GAATGAGTTC GGATTATTAT CGTCTTTTTG AACAAATGCT GTCAGCAAAA
TTTGAATTGG TTAAAACAAA TACTTGGAGT CAATCAGTAG AATACATACA GCATAAAAAA
TGCGATATGC TCGCTTTAGG TATGGAAACG GAAGAAAGGA AAAAATATTT AAACTTCACT
AGTCATTATT TGGATGTTCC GTTAGTTGTG GCCACAAGGG TTGATGTTCC TTTTATTAAT
CAAATTTTGG ACTTAGAAGG TGAAAAAATT GGAATAATAA GAGGTGATGT CTTTGTTAAA
ATATTACGCA CAAAGTATCC ATCTTTAAAA ATAGTAGAAG TTGATGATAT TTATGATGGC
TTAGATCAAG TAAAAAATGG GCAGCTTTTT GCTTATATTG ATACTTTAGC CAGTATTGGA
TACGAGTTTC AAAGTAAATA TTTTGGTGAA TTAAAAATAG CAGGGAAAAT ATCTGAAAAT
TTAAAGCTTT CTATCGCTGT TAGAAAAGAT GATGAGACTC TGTTAGGGAT TCTACAAAAA
GTCGTTAATA ACATTACAAA TGAGCGTCAT AGAAAGATAT TTACAAAATG GATTCCTATA
AAATACGAAC AAGATGTAAA CTATAAAATA GTATGGCAAA TTGTGTTAGC CATTGTGGTT
TTTCTTGCAC TTATGATCTA TTGGAATAGA AAAATAGCCA AAGCAAATAC ACTGTTGAAA
CAAGCTCAAA AAGATATTGA AGAAAAAAAT AAAGAGTTAA ATAGGCTGGC TCTTACGGAT
AACCTAACAA CATTATTTAA CAGAAGAAAG CTGGAAGAGC TTATACAAGC TGAGATTGAT
AAAGGTTACC ATGTTGATAA TAGCTTCTGT CTTTCTATAC TTGATATTGA TCACTTTAAA
GAAGTTAACG ACAAATATGG ACATCAGCGA GGCGACAGCG TTCTTGTTGA GATAGCAAGA
GTTTTGAAAG ACAGTTTAAG AATAACAGAC TATGTAGGAC GTTATGGCGG GGAAGAGTTT
ATTATCATTT TCCCTGAATC AAGTATTGCA GATGTTAAAT TAATAATTGA AGGCGTTAGG
CTTAAGATTG CGCAATATGA TTTTGAGGGA GTTGAACAAA AAACTGCTAG TTTTGGATTA
ACCGCTTTCA AAGCCGGCGA TACGATAGAG ACGGTGGTTA AAAGAGCCGA CAATGCACTT
TATGAAGCGA AAGAAAGCGG CCGTAATAGG GTCGTCGTTA ATTAA
 
Protein sequence
MKKILITLLF LFLYSVGSIA KPLDLTKEEK RFIKDNPVVS IGMMPDFTPF SYYIEGELVG 
FEHDLLTLIS QKTGLKFEKH IDKWTTIYNS FKNKEIDMIS SISYKKYREP FTIFTSPYYN
IPIMIFVKDD FGEYNGLKSL TGKKVGVLKD VFYIKELEEL GSMNLIFYDS YDDLTKDLVF
GKIDALMQNL PNINHLIKKN LYNNIKLASE LVLPNTNRED LRFGIQPEKS LLISILQKSL
ISISKREMEE LSDKWIGSIK EYPGGHIDLD DTEKAYINTH TIKYCINPSG LPFEGLNEDG
EHVGMSSDYY RLFEQMLSAK FELVKTNTWS QSVEYIQHKK CDMLALGMET EERKKYLNFT
SHYLDVPLVV ATRVDVPFIN QILDLEGEKI GIIRGDVFVK ILRTKYPSLK IVEVDDIYDG
LDQVKNGQLF AYIDTLASIG YEFQSKYFGE LKIAGKISEN LKLSIAVRKD DETLLGILQK
VVNNITNERH RKIFTKWIPI KYEQDVNYKI VWQIVLAIVV FLALMIYWNR KIAKANTLLK
QAQKDIEEKN KELNRLALTD NLTTLFNRRK LEELIQAEID KGYHVDNSFC LSILDIDHFK
EVNDKYGHQR GDSVLVEIAR VLKDSLRITD YVGRYGGEEF IIIFPESSIA DVKLIIEGVR
LKIAQYDFEG VEQKTASFGL TAFKAGDTIE TVVKRADNAL YEAKESGRNR VVVN