Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1833 |
Symbol | |
ID | 5367380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 2060578 |
End bp | 2061402 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640804174 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001340692 |
Protein GI | 152995857 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0887778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.832681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCATC GTTCTATACC TATTCAGTAT TGTTTTTCTT CTGACTTTGA AGATTATAAA GAATGTATTG TTAACTACAA AAATATATCC ATATTGTACT ATCAGTTTCG TGCGTCTTCT GATCATACTG TAGTGGTCGC AGATGGTTGT GCGGATATTC AGTTTTGTTG CGATAAAGAT AATGCCTCGT CTACTATCTG GGGTTCTGTA CTGACTCCTC AGCAGATCAT ATTTAATTCA GGGAAAACTT ACTTTGGTAT TCGGTTATCG ACTTCTGTAA GCAGGAGGTT GTCTTTTTTT CGTTACTCTG AACTTATCAA TAAAGGTGTT TCATTATCTG GTTTAAATTA TTTTGGGAAA GAGTTGACTG AAAAGATAAC ACTGGCAAAA AGCTTCAAAG AGCGTATCTT GCTGACTCAA AATTGGTTGA CAGTTTTTGG TTTCTTTGAA CCCAAAAAAA TGGATTTTAT TGATTATAGT ATTAATAAAA TACAGGAAAG TAGAGGAGAT TTAAAAATAT CTGAACTGGC TGAATATATT GGCTCTAGTG AGCGTCTTAT TAGAGATAAA TTTACTCATG CTGTTGGGAT GTCTCCTAAA CAATATAGCA GAATTGTTCG ATTTCAAAGT TTAATTGAGC TCATTGTTTT TAATGATCAT CAGCATTTAC CTTCATTGAA TGATCTAATG TTGTCTTCTT ATTATGATGA GTCTCATTTT ACAAAAGAAG TGAAGTTTTT TTCTGATATG ACACCAAAGA AGTTCATTAA AGAAACTTCA AATGTAGTTA TTAAAAGAAA CACTATTGTC AGTTCACTTT ATTAA
|
Protein sequence | MSHRSIPIQY CFSSDFEDYK ECIVNYKNIS ILYYQFRASS DHTVVVADGC ADIQFCCDKD NASSTIWGSV LTPQQIIFNS GKTYFGIRLS TSVSRRLSFF RYSELINKGV SLSGLNYFGK ELTEKITLAK SFKERILLTQ NWLTVFGFFE PKKMDFIDYS INKIQESRGD LKISELAEYI GSSERLIRDK FTHAVGMSPK QYSRIVRFQS LIELIVFNDH QHLPSLNDLM LSSYYDESHF TKEVKFFSDM TPKKFIKETS NVVIKRNTIV SSLY
|
| |