| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1625 |
|---|
| Symbol | |
|---|
| ID | 5364793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1822666 |
|---|
| End bp | 1824906 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803967 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001340487 |
|---|
| Protein GI | 152995652 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.930758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCCT CTCAATATGC GGGAAATGAA AAAAAGACTA AAAAAAGCAA CCAAGAAACG
CTTTTTTTAA AACATCACGC CGCAAAAAAT GCCCTCTATG CAGGTATCGC AGCTGGAACC
GTTTTTTTGT ATAGCCAATC TGCTTATGCA GAAACTCAAA CAACGACAAA AGAAAACAAC
GCAGTTTCAG CGGTTGCTCT TCCAGAAATC ACAGTCGAAG ATTCTCGTGA AAAAAAACCA
GTGTACTCTG GCAGTAATGG ACAAGTTTTA GAAACAAGCC ACACAGGTTT TTTAGGAGAT
AAAGACGCTT TAGATAACCC ATTCAATGCC ATCAGCTATA CAGACAAATA TATCCAAGAC
CAACAATCTA ATGATATTTC AGATGTCATC AGCGCGACAG ACCCTTCTGT TCATAGCACT
AACACCAGTG GCGAAAGTCG AGAAAGCTAT TCTATCCGAG GTTTCAGCTT CGATAGTAAC
GATGCGACTG TTAACGGTTT AGCAGGCATG GCACCTTACT ATCGCAGTGC TACTGAAATG
TATGAGAGCG TAGATGTGCA AAAAGGCCCT TCTGCCATGC TTAATGGTAT GCCTCCTAGC
GGTTCTATAG GTGGATCCAT TAACTTAGTC ACCAAACGTG CCGGTAATGA CCCTTTAACT
CGCTTAACAA CTAAATACCT ATCCGACTCA CAAGTCGGCG CTAGTGTCGA TGTAAGCCGC
CGCTTTGGTC AAGACAAGCA ATTTGGTATT CGTGTAAACG GTGCATATCT ATCAGGTGAT
GGAACCATTG ATCACCAAGA AAATGAGTCT CAATTAGGAG CCATTGCTTT AGACTGGCGC
AGTAGTCGAA TTCGCTTATC CGCTGACATT TATCACACCA AAGAAAATGT CGACGCACCA
ACGAGAGGAA TAAACCTTGC AAAAGGGCTT GATATACCAC GTCCGCCCTC TAACGATACC
TTACTAAACC CAAGCTGGAA TTTTTTTGAA AGTGAAACTA AGGGAGCTAT GGCACGTGGC
GAATTTGACA TTAATGACCA ACTGACCGCT TATGCCTCTG TCGGTATAAC TAAGTGGGAC
TACCACGGCC TTAGTGCAGA TAAAGCTGAA ATATACAATT CGGCTGGAGA CATAAAAACG
ACCCTTGGCG CTACCGGCGA TGACAATCAA AGAAAATCAC TAGAAATTGG TTTAAATGGA
CGCTTCCAAA CAGGTGCAGT GAAACACCAG GTAGCAACAA ACATCACTCG TTACGAAGAA
GAATACAACC TCTATGCGGC GAGATTTAAA GGTGTGACGA TCGACTCTAA CATATATAAC
CCAGTATGGG GGACAAGACC TGATCTGGAC TTAAACCTAC CTCTTTTGAC GACCACAGAA
ACAACATTAT CCAGTTTTGG GCTAGCAGAT ACATTATCTT TTGCAGATGA CAAATATCAA
TTAACGCTAG GTGCACGCCA TCAGCAAATA AAAACAAAAG AAACGGGGGG AATCTTATCT
ACTGGAGCAG ACTATAATAA AAGCGCAATA AGCCCCTCAG CTGCTCTCAT TATAAAATTA
GCAGATCAAG TTTCTGCTTA CGCAAACTAT ATTGAAGGGT TAAGCAAAGG CCCAATAGCA
CCAACCACCG CAGATAATGC TGGTAAAAAA TTCGCACCCT ACAAAACCAA GCAAAAAGAA
GTAGGTTTAA AGCTTGATCT AGGAGACTTT AGCCATACCG TTAGTCTCTA TGAAATTGAA
AAGCCTAACA GCTATACAGA CCCTAACACC AAGTTATTTG GTATCTATGG TGAGCAACGT
AACCGTGGTG TGGAATGGAG CTTCTTTGGT ACACCAGTTG ACCATATTCG ACTAATGGGT
GGCCTGACAC ATATTGAGGC AGACTTAAGA TCAACGAGTA ACGGAGATAA TAATGGCAAG
CAGTCTGCTG GCGTTCCAAA GTGGCAAGCC AAACTTGGAG CTGAGTGGGA CACCCCATAT
ATACAAAACC TAACGCTAAT AGTTAATGCA AACAGCATAT CTAAACAGTA TCTGGAAGAT
GATAATAAAC GATCTATTCC TGGCTACACT ATATTTGGAT TAGGGGCGCG CTATGTGACT
TCGGTAAACC AACAACCTCT CACTATCAGA GCCAATATCA ACAACCTAAC TGATAAAGAC
GCTTGGACAA CAGCAAGCTA TAACGCTCTA GGTCTTGTTG AGGGACGATC TCTTACAGTG
TCAGCAACCA TGGATTTTTA A
|
|---|
| Protein sequence | MYSSQYAGNE KKTKKSNQET LFLKHHAAKN ALYAGIAAGT VFLYSQSAYA ETQTTTKENN
AVSAVALPEI TVEDSREKKP VYSGSNGQVL ETSHTGFLGD KDALDNPFNA ISYTDKYIQD
QQSNDISDVI SATDPSVHST NTSGESRESY SIRGFSFDSN DATVNGLAGM APYYRSATEM
YESVDVQKGP SAMLNGMPPS GSIGGSINLV TKRAGNDPLT RLTTKYLSDS QVGASVDVSR
RFGQDKQFGI RVNGAYLSGD GTIDHQENES QLGAIALDWR SSRIRLSADI YHTKENVDAP
TRGINLAKGL DIPRPPSNDT LLNPSWNFFE SETKGAMARG EFDINDQLTA YASVGITKWD
YHGLSADKAE IYNSAGDIKT TLGATGDDNQ RKSLEIGLNG RFQTGAVKHQ VATNITRYEE
EYNLYAARFK GVTIDSNIYN PVWGTRPDLD LNLPLLTTTE TTLSSFGLAD TLSFADDKYQ
LTLGARHQQI KTKETGGILS TGADYNKSAI SPSAALIIKL ADQVSAYANY IEGLSKGPIA
PTTADNAGKK FAPYKTKQKE VGLKLDLGDF SHTVSLYEIE KPNSYTDPNT KLFGIYGEQR
NRGVEWSFFG TPVDHIRLMG GLTHIEADLR STSNGDNNGK QSAGVPKWQA KLGAEWDTPY
IQNLTLIVNA NSISKQYLED DNKRSIPGYT IFGLGARYVT SVNQQPLTIR ANINNLTDKD
AWTTASYNAL GLVEGRSLTV SATMDF
|
|---|
| |