Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1602 |
Symbol | |
ID | 5367959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1793113 |
End bp | 1794135 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640803945 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001340465 |
Protein GI | 152995630 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.637906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACAGC AACGACCGAA AAACATCGCC AGCGCCGCAG AGGTGGCCAA ACTAGCAGGC GTTTCTCGGT CTGCTGTTTC TCGCACCTTT ACCCAAGGTG CGAGCGTTTC CAAAGACACT CGTGAACGTG TGCTGGCCGC AGCCGCAGAA TTGAATTATC ACGTAAATCA TCTTGCTCGG GGCTTATCCA GCGAAAAAAG CCGACCTGTT TGTATTCTAG GCGCCAATCT TAATGCTCCT TATCAAGCAA GCTTGCTCGA TGCTCTCACC CAACGTCTGC AACTGGCTGG TCGAGCCGTG ATGGTGATTA ACACCTCAGG CGGTGAAGCC AGTGCCGATG CGGCGTTACG TCAAACATTA AATTATCGCG CCTCGGCAAC CATCGTTCTA TCAGGCACAC CACAAACCAC TTTGATTGAA ACTTGTGTAC AAAGCGGACA ACAAGTCATC CTTGTGAACC GTGCTGGGCA ATTTGAAGGC ACAGACCACA TCAGCATAGA TTATCAATCT GCTATGGCTG ACGCCCATCA CATGCTGCTA CGAGCAGGCT GCCAGAAGCT TGCGGTTGTG TCGTCGACAA TTCAATCCCC AAGCTTGTTG ACTCGTGAAA AACTGTTTAT TCATGCTGCC GAAGACGCCA AGCAAGCTTG TACCTTGTTA CGAGCAGGAC CAACGAGTTA CCAAACTGGT GTAGACGCAG CACGACGGTT ATTGGCCTCT CGGGATAGAC CGGATGGCGT TTTTTGTGTC ACTGATCTGA TTGCTTGCGG CTTTATGGAT GTGGCGAAAA ATGAATTTGG TCTACGTATT CCAGAAAATA TCTGCATTGT CGGATTCGAT GATATTGAAC AAGCAAGTTG GCTTGGCTAC CAACTCACCA CGTTCTCTCA ACCACTTGGT GCAATGGCAG ATGCTATTTC AACATTACTG GAAAACGCCT CTGACAAAGA GCGTAAAAAA CAACATCTAA TATTTCACGC TCCACCAGTG TGGAGACACA CCGTACGTCC AAGCGCTTCA TAA
|
Protein sequence | MTQQRPKNIA SAAEVAKLAG VSRSAVSRTF TQGASVSKDT RERVLAAAAE LNYHVNHLAR GLSSEKSRPV CILGANLNAP YQASLLDALT QRLQLAGRAV MVINTSGGEA SADAALRQTL NYRASATIVL SGTPQTTLIE TCVQSGQQVI LVNRAGQFEG TDHISIDYQS AMADAHHMLL RAGCQKLAVV SSTIQSPSLL TREKLFIHAA EDAKQACTLL RAGPTSYQTG VDAARRLLAS RDRPDGVFCV TDLIACGFMD VAKNEFGLRI PENICIVGFD DIEQASWLGY QLTTFSQPLG AMADAISTLL ENASDKERKK QHLIFHAPPV WRHTVRPSAS
|
| |