| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1596 |
|---|
| Symbol | |
|---|
| ID | 5369061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1786810 |
|---|
| End bp | 1787742 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640803939 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001340459 |
|---|
| Protein GI | 152995624 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA CGAATAAAAA TAATAATGTG ACAACTGATT TAAAGATCAG AATTGGCATT
AACCCACTAA CTTGGACCAA CGATGATCTG CCATCATTGG GTGCCGATAC TCCGTTAGAA
GTGTGCTTGA GCGAAGCGCG TCAGGCAGGT TACAGCGGCA TTGAGTTAGG CAATAAATTT
CCCCGTGATG CCAGTGTGCT CGGGCCGATT TTAAAGCAAT ACGACTTATC ATTGGTGTCC
GGTTGGTACA GCGCGCGTTT GTTAGAGCGG AGTGTGGAAG AAGAGATTGC GGCCATGCAG
GATCATCTTA ATTTGCTGAA AGCTTTGGGT TCTAACGTCA TGGTATTTGC TGAAGTCAGC
GGATGTGTTC ATGGGGATCA ATCAGTACCT CTGTCACAAC GTCCACGCAT GACCCAAAGT
CAGTGGGAGG GATATGCAAA ACGTATGACG GCTGTCGCTG ATTATATGGC GTCTGAAGGC
GTCAAAATGG CCTATCACCA TCATATGGGG ACTGTGATCG AAACCGCGGA AGAGGTCGAC
AAGCTGATGC AGATGACGGG TGATAATGTG GGATTGTTGT TGGATACAGG GCACATTACC
TTTGCGGGTG GTGATGCTTT GGCGATGGCG AAGAAACACG CTAAGCGCAT AGTGCATGTG
CATTGTAAGG ACATTCGCCT GGATGTTTTG AAGGACAACC TTAATCGCGA TAGTGCCTTT
TTGAACGCGG TTCTAGATGG TGTTTATACC GTTCCTGGAG ATGGTGGTAT CGATTACTTC
CCAATTTTTG AAGTGCTGAA AGCAGCCGAT TATCAGGGCT GGATTGTCGT GGAAGCGGAG
CAAGATCCAG CTATTGCGCA TCCATTAACT TATGCGACAA AAGGTTACGA GTATTTGTCA
GCGAATTTAG CAAAGGCCGG TTTTCATTTT TAA
|
|---|
| Protein sequence | MNSTNKNNNV TTDLKIRIGI NPLTWTNDDL PSLGADTPLE VCLSEARQAG YSGIELGNKF
PRDASVLGPI LKQYDLSLVS GWYSARLLER SVEEEIAAMQ DHLNLLKALG SNVMVFAEVS
GCVHGDQSVP LSQRPRMTQS QWEGYAKRMT AVADYMASEG VKMAYHHHMG TVIETAEEVD
KLMQMTGDNV GLLLDTGHIT FAGGDALAMA KKHAKRIVHV HCKDIRLDVL KDNLNRDSAF
LNAVLDGVYT VPGDGGIDYF PIFEVLKAAD YQGWIVVEAE QDPAIAHPLT YATKGYEYLS
ANLAKAGFHF
|
|---|
| |