| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1356 |
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| Symbol | |
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| ID | 5368028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1515377 |
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| End bp | 1516489 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640803700 |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_001340220 |
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| Protein GI | 152995385 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000187221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTTTG AATCACCTAT AAAACGCCGT CACTCCCGTC AGATCATGGT TGGGAATGTG
CCGGTTGGCG GTGGTGCGCC AATCAGTGTT CAAAGTATGA CGAACACAGA AACTTGTGAT
GTTGATGCGA CCGTGGCGCA GATTCGTGCT ATTGCCGATG CTGGTGCCGA TATTGTTCGC
GTTTCTATTC CGTCTATGGA TGCAGCAGAA GCATTCAAAA AAATACGCGA AGCTGTTTCT
ATTCCATTGG TCGCTGATAT TCATTTCGAT TATAAAATCG CTTTGAAAGT GGCTGAGTAT
GGTGTTGATT GCCTACGGAT AAATCCAGGT AATATTGGTA ACAAAGATCG TATTCGCGCT
GTTGTGGATT GTGCTCGAGA CAAAAATATT CCGATCCGTA TTGGTGTCAA TGCAGGCTCT
TTAGAAAAAG ATCTGCAAAA AAAATATGGT GAACCGACTC CTGATGCACT AGTTGAGTCC
GCTTTTCGTC AAATACAATA TTTTGATGAA TTGGATTTCC ATGAGTACAA GTTGAGTCTT
AAAGCATCTG ATATTTTCAT GACGGTTGAA GCCTACCGGA AAATTGCCAG CCAGATAGAT
AACCCGCTGC ATTTGGGTAT TACTGAGGCG GGTGGTTTGC GCTCTGGAAC GGTTAAGTCC
TCCATTGGGC TTGGTTTGCT TTTAATGGAC GGTATTGGTG ACACCTTGCG TGTTTCTTTA
GCAGCTGACC CTGTTCATGA AATTAAAGTC GGTTGGGACA TGCTCCGTAG TTTGAAATTG
CGTAATCGAG GTATTAATTT TATTGCTTGT CCAAGCTGTT CTCGTCAAAA TTTTGATGTT
ATTAAAACGA TGAATGAGTT AGAAGAGCGT CTTGATGACA TAACCATTCC AATGGATGTT
GCCGTTATAG GCTGCGTGGT AAATGGACCT GGCGAAGCAA AAGAAGCGGA TATAGGTCTT
GCTGGTGGTT CACCGAATAA CTTGATTTAT CAAGATGGTA AACCGGACAG TAAAACAAAA
AATGAAACGC TCGTTGATGA TTTAGAAAGA ATGATTCGTA AAAAGGCTCT CCTAAAAGAA
CAGGAATTGG CCAATATCAT TGTAAAAAAT TAA
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| Protein sequence | MHFESPIKRR HSRQIMVGNV PVGGGAPISV QSMTNTETCD VDATVAQIRA IADAGADIVR
VSIPSMDAAE AFKKIREAVS IPLVADIHFD YKIALKVAEY GVDCLRINPG NIGNKDRIRA
VVDCARDKNI PIRIGVNAGS LEKDLQKKYG EPTPDALVES AFRQIQYFDE LDFHEYKLSL
KASDIFMTVE AYRKIASQID NPLHLGITEA GGLRSGTVKS SIGLGLLLMD GIGDTLRVSL
AADPVHEIKV GWDMLRSLKL RNRGINFIAC PSCSRQNFDV IKTMNELEER LDDITIPMDV
AVIGCVVNGP GEAKEADIGL AGGSPNNLIY QDGKPDSKTK NETLVDDLER MIRKKALLKE
QELANIIVKN
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