Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1252 |
Symbol | |
ID | 5367204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1403211 |
End bp | 1404533 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803591 |
Product | RNA methyltransferase |
Protein accession | YP_001340116 |
Protein GI | 152995281 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0113803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.599775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAGAA GAACATCCCC ACGCCGAACA ACTACCTCTA AGCCGCAGCC TATTGGTCCA ATACAGACCT TCGAAGTGGA CGGTTTGACG CATGAAGCAA AAGGCGTCGC TCGTTTACAA GGTAAAGTAA CTTTTATTGA AGGTGCTTTG CCTGGTGAAA CAGTCGAGGC GCAAGTTAAT AAAGCAGGGC GTCGCTTTGA TGAAGCTGTT TTGGTGAATA TTATTGAGCC GAGCGTTTAT CGAGTTGAGC CCTCTTGTCA GCATTTTAAT CTCTGCGGTG GTTGTAGTTT TCAGCATTTA GCTAATGAGC AACAGCTAAG TGCAAAAGCT GATTGGTTGC AAGGACAACT GCGTAATCTG ATTACAACCC AAGAATTAGA GACCTTATCA GATACACCTA CAGGTTATCG TCGACGTGCT CGTCTCGCGA TTGATATCAA AAAAGGCCGT ATGGTATTGG GTTTTCGTGG TAAAGCATCT AAGGAAATTA TCTCAATTGA TCAATGTGTT GTGCTTACTC CTAATTTGCA AAGTACCTTC CTTTTACTCA AACTCAAGTT ATTAGAAAAT GATTTGGCGG GTGTGCTTGG ACATGTGGAA TTACTTGAAG ACACTAAAGG TGTTTCGGCG TTGTTTCGCT TAACGTCTCC AATATCTGAT GAACTTAAAA ATGCATGGGA AGATTGGGCT GAAAAAGGGC GGGTCGCTTT ATATTGGCAA GCACCAAAAG TGGGCAAGGC GGAAGTGGCG CTTGAAAAAA TGCGCTATTA TGATCTTGGT GACTTAAGGT TGAAATATCA CCCTCAAGAC TTTATTCAAG TAAATGCTGC TATGAATCAA AAGATGGTAG TGCAAGCAAT GGACTGGTTA AATCCAAGTA AGCAAGATGT AATATTGGAT TTGTTTTGCG GCGTAGGGAA TTTTTCTTTA CCGCTAGCAG TGCATGCTCA AGCAGTTATT GGTGTTGAAG TGCAAGAGAC AATGGTCGAA GCCGCGCGAG AAAATGCGCG AGTGAATGGT TTTGATAACC TGTCGTTTGT GGCAGCAGAT TTGACTAAGC CTGTGAATAA TGAACTTTTT AAGCAGACCA TTACCAAAGT ATTGTTGGAT CCTCCTCGTG CTGGAGCGTT TGAATTTTTA GATAGCATAA TAAAAATTGG GCCGACGCAA ATATTGTATG TTTCTTGCAA TGCTTCTACT TTAGCTAGGG ATGCCGAGTA TTTAGTTGCA AAGGGATATC GTGTTTTACG TGTTAGTTTG ATGGATATGT TTCCGCAAAC CTCTCATGTA GAAACGATGA TGTTATTGCA AAAAAAGAAG TAA
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Protein sequence | MRRRTSPRRT TTSKPQPIGP IQTFEVDGLT HEAKGVARLQ GKVTFIEGAL PGETVEAQVN KAGRRFDEAV LVNIIEPSVY RVEPSCQHFN LCGGCSFQHL ANEQQLSAKA DWLQGQLRNL ITTQELETLS DTPTGYRRRA RLAIDIKKGR MVLGFRGKAS KEIISIDQCV VLTPNLQSTF LLLKLKLLEN DLAGVLGHVE LLEDTKGVSA LFRLTSPISD ELKNAWEDWA EKGRVALYWQ APKVGKAEVA LEKMRYYDLG DLRLKYHPQD FIQVNAAMNQ KMVVQAMDWL NPSKQDVILD LFCGVGNFSL PLAVHAQAVI GVEVQETMVE AARENARVNG FDNLSFVAAD LTKPVNNELF KQTITKVLLD PPRAGAFEFL DSIIKIGPTQ ILYVSCNAST LARDAEYLVA KGYRVLRVSL MDMFPQTSHV ETMMLLQKKK
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