| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1163 |
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| Symbol | |
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| ID | 5367700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 1296666 |
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| End bp | 1298861 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640803502 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001340027 |
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| Protein GI | 152995192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGAAAG CAGAGTTTAA GCAGCCTTCC GCCTTATTTT TTTCATTCGT TGCTTTCTTC
ATTATTGCTT TTTGTGGGGG CTATTGGACT CAGTCAACAA ACAAATCCAT AGTGAATCAG
CAACAGTCTC TTTTAAGTGG CATATCTAGA ACACAAGCAT CCGTTCTAGA AAGACGTCTT
TCGTCTGCCT TCACCTCAGC ACAAATTCTA GCTTATGAAG TAGAACAAAA TGGCGGTAGC
GGTGAGTGGT TTCCTAATTA TGCAAACAAG CTAATCGAGT CAATCGGTGG TATTGAAAAC
CTTCAGCTTG CGCCCGATGG TGTTATTTCT GATATCTATC CTCTGAAAGG AAACGAAAAC
GCCATAGGGT TTAACGTCAT ATCAACACCT GGCTTTAAAG AAGAGGCTAT GCTGTCTGTT
AAAAATCATC AGATGTTTGT CATAGGTCCG GTCGCATTAG TTCAAGGTGG CGTTGCCGTC
ATCAGTCGAG CCCCTATTTT CTTGCATAAA GGAACACAAA GAGAGCTATT CTGGGGCTTT
GCTTCAGCAG TTATTTATTT AGACAATTTA TTAGAAGCAA CACAATTAAA ACAACTAGAA
AGTGAGGGTT ATCAGTATAG CCTGTCAAGA AAGCATGCTG CGACAAAGGA AATCATCGTT
TTATCAGACT CAGTTACACC ACTTTCTGAT ATTCAAGCTT CGACAAATCT AATTCTGCCA
GTGGGCACTT GGACTCTGCG AATAAGCCGA GCATTAGACA CACAGTTAAA ACAGCGAAAG
ATAACTGGCT ATGCCATCAG CTTTGCGGTG GCATTTTTAC TCTCTCTTGC TTTATATGCC
ATCTTAATCC AGCCATTAAA ACTCAGAAAA TTAGTCAAAG AAAAAACCGC AGAACTTCAA
GAGCTCGCCT ATAAAGACCC GTTAACTGGC TTGCCAAATC GACGTTTTTT ACAAGATAGC
TTACCCAAGA CCCTGCATAA CAACCAGAGG CGTAAACGGA TATCTGCTTT TATCTATTTC
GATCTAGATA ACTTTAAACG CATTAATGAC ACCATCGGAC ACGATGTTGG GGACCAAGTA
CTTATTATTG TTGGAGACAG ATTAAACAAA CTAAAAGCCA TGTCTGATCT TGTTGTACGC
TTGGGCGGTG ATGAATTTGG GATCCTACTG GGGGACATTG GCGATGAAAA ACAAGCTAGT
GAACAAGCGA ATCGAATACT AGAGAGCATT CGAACTCCCA TTAAAATGGA TTCACGAGAG
TATATTTTAA GCACGTCATT GGGTATCGCG ATGATTCCAG AGCATGGTTA TGATCTAGTC
ACCATCATGC AAAATGCCGA CATGGCACTG TATCAAGCTA AGCTAAAGGG TAAAAATCAG
TATGCTTTTT ATACTGAAAA AATGAAGATC AGCACGCATA ACTTAATTAA AGCGGAAGAA
GATTTAACGC TTGCGTTACA AAGAAATGAA TTTGAAATGT ATTACCAGCC ACAATTTAAT
ATTCGCACCA ATCATGTCTT TGGTGCTGAA GCACTAATTC GCTGGAACCA CCCAGAAAAA
GGTGTAATTT TCCCTAATGA CTTCATTCCT CTCGCGGAAA GCACAGGAAA AATTGTTGAA
TTGGGCTATT GGGTTCTGGA AAGTAGTATC GCTTACCTAG CAAAGCGAAA ACAGGAAGGT
AGACCTGATA TTCTATTACA TATCAATCTT GCGTCAGAAC AATTATCAGA TCCTCACTTT
GTAGCTTTAG TCCAAGAGCT GCTTGGAAAA TATCAAGTGC CGGCTCATTT AATTGGTTTT
GAAATCACTG AAACCTCTAT TCTTGAAGAC ATACATCTCG CTAGATATTT GTTACAAACA
CTAAAAGATA TGGGTATTTG TATCGCTATT GATGATTTTG GCACTGGGTA TTCATCGCTA
TCTCAACTTA AAAACCTTCC TGTAGATTTG CTAAAAATTG ATCGTAGTTT TGTGATGGAT
TTAGAGAATG ATCCAGATGA TCGCAAAATC GTCGAAGCGA TCATTGCCAT GGCTCATAAA
CTCAATATCA AAGTATTAGC GGAAGGTGTA GAAACTAGAG AACAATGGAA AATGCTGGCG
GCGTTCCAAT GTGATTTTGG TCAAGGCTAC TATGTTAGCA AGGCGGTAAC AGCCGATGAG
TTTAACCAAG GCTCTCCGAT TATTCATAAG GATTAG
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| Protein sequence | MKKAEFKQPS ALFFSFVAFF IIAFCGGYWT QSTNKSIVNQ QQSLLSGISR TQASVLERRL
SSAFTSAQIL AYEVEQNGGS GEWFPNYANK LIESIGGIEN LQLAPDGVIS DIYPLKGNEN
AIGFNVISTP GFKEEAMLSV KNHQMFVIGP VALVQGGVAV ISRAPIFLHK GTQRELFWGF
ASAVIYLDNL LEATQLKQLE SEGYQYSLSR KHAATKEIIV LSDSVTPLSD IQASTNLILP
VGTWTLRISR ALDTQLKQRK ITGYAISFAV AFLLSLALYA ILIQPLKLRK LVKEKTAELQ
ELAYKDPLTG LPNRRFLQDS LPKTLHNNQR RKRISAFIYF DLDNFKRIND TIGHDVGDQV
LIIVGDRLNK LKAMSDLVVR LGGDEFGILL GDIGDEKQAS EQANRILESI RTPIKMDSRE
YILSTSLGIA MIPEHGYDLV TIMQNADMAL YQAKLKGKNQ YAFYTEKMKI STHNLIKAEE
DLTLALQRNE FEMYYQPQFN IRTNHVFGAE ALIRWNHPEK GVIFPNDFIP LAESTGKIVE
LGYWVLESSI AYLAKRKQEG RPDILLHINL ASEQLSDPHF VALVQELLGK YQVPAHLIGF
EITETSILED IHLARYLLQT LKDMGICIAI DDFGTGYSSL SQLKNLPVDL LKIDRSFVMD
LENDPDDRKI VEAIIAMAHK LNIKVLAEGV ETREQWKMLA AFQCDFGQGY YVSKAVTADE
FNQGSPIIHK D
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