Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1146 |
Symbol | |
ID | 5368291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1279860 |
End bp | 1280741 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640803485 |
Product | polyprenyl synthetase |
Protein accession | YP_001340010 |
Protein GI | 152995175 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.297824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTTAA ACGATTTTTC TCAATATGCT CGCCGTAGAG TTGATGACTA CCTTACGCTT AATTTAGGCC AATACGAACC TGCAACCCAT TTACAGAATG CCATGGCATA TAGCCTATTT AATGGTGGCA AACGTGTTCG CCCTATGCTG ACCTATGCCG CCGCATCCTT ATTTGGCGAA GCTAATAACC TTACAGATGC CAGTGCAGCG GCGATAGAGT CCATACATGC TTATTCCTTA ATTCATGATG ATCTGCCTGC TATGGACGAC GACGACCTGC GTCGCGGCAA ACCTACTTGC CACATACAGT ACGATGAAGC GACCGCCATA CTTGCAGGTG ATGCATTACA AACGTTTGCC TTTGAGTTAT TGAGCAACCC GAAACACCAA AGTACTAAAG TGCAGCTACA ATTGATTCAA GAACTTGTTC ACGCTTCTGG TCGTCATGGC ATGGTTACCG GACAAATGAT TGATTTGGCC AATGTTGGCA ACAGCATCAA TATTGATGAA CTTGAGCAAA TGCACCAACA TAAAACAGGC GCACTTATTC GAGCTAGTAT TCGTATGGGA GCCATCAGCA CTGGTGCCAA AAGCGAAGCT GATTTTGCTG CACTAGATGC TTATGCCGCA GCAATTGGCC TAGCTTTTCA AGTTCAAGAC GACATTATTG ATATTACCAG TGATACAACA ACGCTGGGCA AAACTCAGTT CTCGGATGAA GAGGCAAACA AACCAACTTA TCCTAAGCTG CTTGGTTTAG CAGGCGCTCA AGTGCTAGCT CAAAACCTAC ATAGCCAAGC CATTACAGCG ATTTCGCCAT TTGGTGACGC TGCTCAGCCT TTAGTTGAGC TTGCGAACTA TATTATTGGT CGCAACCACT GA
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Protein sequence | MTLNDFSQYA RRRVDDYLTL NLGQYEPATH LQNAMAYSLF NGGKRVRPML TYAAASLFGE ANNLTDASAA AIESIHAYSL IHDDLPAMDD DDLRRGKPTC HIQYDEATAI LAGDALQTFA FELLSNPKHQ STKVQLQLIQ ELVHASGRHG MVTGQMIDLA NVGNSINIDE LEQMHQHKTG ALIRASIRMG AISTGAKSEA DFAALDAYAA AIGLAFQVQD DIIDITSDTT TLGKTQFSDE EANKPTYPKL LGLAGAQVLA QNLHSQAITA ISPFGDAAQP LVELANYIIG RNH
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