Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1145 |
Symbol | |
ID | 5368432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1277931 |
End bp | 1279808 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640803484 |
Product | deoxyxylulose-5-phosphate synthase |
Protein accession | YP_001340009 |
Protein GI | 152995174 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.820706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAG AGATACCTAC AGCGCGACCT GACACGCCGC TACTTGATGA AGTCAACTCA CCAGCTGACT TACGCGCCTT TAAAAAAGAG CAATTGCCAG CTCTTGTCCG CGAATTACGA GAGTTCATGC TTTACAGTGT TGGACAAACT GGCGGCCATT TTGGCGCAGG TCTTGGTGTC GTAGAACTTA CGGTTGCCCT GCATTATTTA TACAACACAC CAGAAGATCG CATTGTTTGG GATGTAGGTC ATCAAGCCTA CCCCCATAAA ATTTTAACGG GTCGTCGTGA AGCTTTGCTC AACATTCGAC AAGAAAACGG TATATCGGGA TTCCCCAAAC GCGATGAAAG TGAATACGAT ACTTTTGGTG TTGGTCATTC AAGTACGTCT ATTGGTGCTG CACTGGGTAT GTCTCTCGCT GCACGACAAC TAAAAACTGG CCGCAAAGCT GTTGCTATCA TTGGCGACGG AGCCATGTCT GCAGGCATGT CATTCGAAGC ACTTAATCAC GCAGGTGATG TTAAAGCTGA CATGTTGGTC ATTTTAAATG ACAACGAAAT GTCCATATCA AAACCAGTTG GTGCATTATC TAGTTACTTT GCTCGCATAT GGGCCAGCAA GACCTACGAC AACATTAGAG AAGGTGGAAG AAAAGTCTTC TCAGGCTTAC CTTCTGCATT AGAACTCGCT CGTAAAGCCG AAGAACACAT GAAAGGTATG GTATCGCCTG GTATGATGTT TGAGGAGCTA GGTTTTAACT ATATCGGGCC AATTGATGGT CACGATATGG ATCATTTATT GACAACCATT GCCAATTTGA AAGACAGAAA GGGACCTCAA TTCCTGCATG TCATCACCAA AAAAGGCAAA GGCTTTGAAC CTGCTGAAGG TGATCCAATA GGCTATCACG CCATCAATAA GATAGAACCA GACCCAAAAC CCAATGTAGA CAAAAGCAAA TTGCCCAAAT ACTGCAATGT CTTTGGTAAA TGGGTATGTG ATGCCGCCGA ACAAGACGAC AAATTGGTTG CTATCACGCC AGCTATGAAA GAAGGCTCTG ACCTCATTGA ATTTGCTGAT CGCTTTCCAG AGCGATATTT TGATGTTGCC ATTGCTGAAC AACATGCCGT GACATTAGCA GCCGGAATGG CTTGCGATGG AATCAAACCC GTAGTTGCAA TTTACTCAAC TTTCCTACAG CGTGCCTACG ATCAACTTAT TCACGATGTT GCCTTGCAGA ATTTGGATGT TTTATTCGCC ATTGATCGAG CAGGATTGGT GGGTGAAGAT GGTCCTACTC ATGCTGGTGT TTACGATTTA AGCTATCTTC GTTGTATTCC AAACATGGTT GTTATGGCTC CATCAGACGA AGACGAATGC CGTAAAATGC TACAAACTGG CTATGAATAC AAAGGCCCAG CTGCAGTACG TTATCCGCGA GGAACAGGCC AAGGCGTCGA CATTGAATCA ACACTAAGCA CACTTAAAAT TGGTAAGTCT CGTACGCTAC GCACAGGGCA ATCAGGTATT GTTATCTGTG GCTTTGGCCG CCCTACTTAC GATGCGCTAA AAGCTGCGAA TACATTAGAC GCAACCTTGC TCGACATGCG CTTTGTTAAA CCGATCGATG AAGAAACGTT ACTTACTCAT CGCGATGCAA AGCTCATCGT CACCGTTGAA GAAAATGCCA TCATGGGCGG AGCAGGATCA GCAGTTAGTG AGTTGCTAAT TGCGAACAAT ATAAACATTC CAACGCTTCA CCTTGGTCTT CCAGATCAAT ATGAAGAACA TGCTAGCCAT GCTTCCATGC TAAAACGCGT AGGACTGGAT GCAGATGGTA TTCAGAAATC CATCGAGTTA AAACTGACCC ATTTGTAA
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Protein sequence | MFEEIPTARP DTPLLDEVNS PADLRAFKKE QLPALVRELR EFMLYSVGQT GGHFGAGLGV VELTVALHYL YNTPEDRIVW DVGHQAYPHK ILTGRREALL NIRQENGISG FPKRDESEYD TFGVGHSSTS IGAALGMSLA ARQLKTGRKA VAIIGDGAMS AGMSFEALNH AGDVKADMLV ILNDNEMSIS KPVGALSSYF ARIWASKTYD NIREGGRKVF SGLPSALELA RKAEEHMKGM VSPGMMFEEL GFNYIGPIDG HDMDHLLTTI ANLKDRKGPQ FLHVITKKGK GFEPAEGDPI GYHAINKIEP DPKPNVDKSK LPKYCNVFGK WVCDAAEQDD KLVAITPAMK EGSDLIEFAD RFPERYFDVA IAEQHAVTLA AGMACDGIKP VVAIYSTFLQ RAYDQLIHDV ALQNLDVLFA IDRAGLVGED GPTHAGVYDL SYLRCIPNMV VMAPSDEDEC RKMLQTGYEY KGPAAVRYPR GTGQGVDIES TLSTLKIGKS RTLRTGQSGI VICGFGRPTY DALKAANTLD ATLLDMRFVK PIDEETLLTH RDAKLIVTVE ENAIMGGAGS AVSELLIANN INIPTLHLGL PDQYEEHASH ASMLKRVGLD ADGIQKSIEL KLTHL
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