Gene Mmwyl1_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_1136 
Symbol 
ID5367912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp1271278 
End bp1271847 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID640803475 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001340000 
Protein GI152995165 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT CTTTATTATC GGAACAGCAC ACGACAGAAT CATTATCAAA TTTGCTGCTT 
AGAGTTGCTC AAGAAGATCG TCTGGCCTTC TCTGAGTTAT ATGAGGCTAC CCATCGGAAA
CTTTTTGGCA TTGTTTATCG TATCTTGAAG AATCAGGCTG CCTCTGAAGA GGTGCTGCAA
GAGGTGTACC TCAAAGTGTG GGAAAAAGCG GCGAGTTTTG ATGCTAGCGT AGCGTCACCA
ATAACTTGGA TGGCCACCAT TGCACGTAAT AGAACGATTG ATGAAGTGCG AAAGAATACT
CTGCCTGACA GTGATGTCGA TGTAGATTTT GATTTAATAG CAGATGATTC GATGGCGCCG
GATGACTCTT TTACTAAGAG CCGAGATTTA TTAAAACTTG AAGCTTGCTT AGCTGAACTT
GAATCGCCTC GTGCGGAGAT GATTAAGGCC GCGTATCTAG ACGGCTTTTC TCGTCAAGAG
CTTGCAGAAC GTTTTGAGCA GCCGCTAGGT ACTATTAAAA CTTGGCTTCA TCGCAGCATT
AAGCAGCTGC AAGGTTGTAT GAATTTATGA
 
Protein sequence
MNQSLLSEQH TTESLSNLLL RVAQEDRLAF SELYEATHRK LFGIVYRILK NQAASEEVLQ 
EVYLKVWEKA ASFDASVASP ITWMATIARN RTIDEVRKNT LPDSDVDVDF DLIADDSMAP
DDSFTKSRDL LKLEACLAEL ESPRAEMIKA AYLDGFSRQE LAERFEQPLG TIKTWLHRSI
KQLQGCMNL