| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1011 |
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| Symbol | prfC |
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| ID | 5368355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1125683 |
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| End bp | 1127269 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640803345 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001339877 |
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| Protein GI | 152995042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACC AGAATTTTCT TAATGAAGTA AGCGATAGAC GTACCTTTGC GATTATTTCC
CACCCTGACG CCGGTAAAAC CACCATCACT GAAAAGCTTT TGCTGCTTGG TCAGCTGATT
CAAACAGCTG GTTCTGTAAA AGGTCGTAAA GGTGATAAGC ACGCTACATC TGACTGGATG
GCAATGGAAA AACAGCGTGG TATCTCAATT ACCTCTTCTG TGATGCAATT TCCATACAAA
GATCGTATTG TTAATTTGCT TGATACACCT GGACACGAAG ACTTCTCGGA AGATACTTAC
CGCACACTTA CTGCAGTTGA CTCTGTATTG ATGATCATCG ATGGTGCGAA AGGTGTAGAG
GATCGTACTA TCAAATTGAT GGACGTTTGT CGTTTACGTG ACACGCCTAT TTTGACTTTC
ATCAACAAAA TGGATCGTGA TATTCGTGAT CCGATTGAAT TGTTAGATGA AGTAGAAGAA
GTCCTAAAAA TCGCAGCGGC TCCTATTACT TGGCCTATCG GCATGAGTGA TTTCTTTAAA
GGGGTTTATA ACCTTTATAC CGATACTATC CATGTTTTTG TTCGTGGACG CGGTCATACC
TTGATGGATG ATATTCGTAT CGAAGGTTTG CAGTCTAATG AAGCAAAAGA ATTGCTTGGT
GATGATTGGG AGTCTTATGT CGACGAGATT GAGTTGGTTC GTGGAGCGAG TCATGAATTT
GACCATGACG CTTATTTGAG AGGTGAACTC ACTCCGGTAT TTTTTGGTAC AGCATTGTCG
AACTTTGGTG TTCGTGAAAT GTTGGATGGC TTTGTTGAAT GGGCTCCTGC GCCCATTGAT
CGCGAAACCA ATAGTCGTAA AGTTGAGGCG AAGGAAGAGA AGTTCTCAGG CTTCATTTTT
AAAATTCAAG CCAACATGGA CCCTAAACAC CGAGACCGTA TTGCGTTTAT GCGAGTGTGT
TCTGGAACCT ATAGTCGTGG CATGAAAATG CGCCATTGCC GTATTGGTAA AGATATTAAA
GTGACGGATG CGGTATCTTT TACAGCAGGG GATCGTGAGG GGGTTGAAGA GGCCTTCTCT
GGTGACATTA TTGGTTTGCA TAACCATGGT ACGATCCAGA TAGGTGATAC TTTTACGGAA
GGTGAAGATT TAAAGTTCAC AGGTATTCCT CACTTTGCGC CTGAGTTATT CCGCCGTGTA
CGCTTAAAAG ATCCGATGAA AATGAAAGCT TTACAAAAAG GTTTACAGCA ACTTTCTGAA
GAAGGTTCCA CTCAGTTATT CATGCCTCAA CGTAATAATG AGCTCATTGT TGGTGCAGTT
GGTCAGCTGC AATATGAAGT TGTCGCGTAC CGTTTGAAAG ACGAATACAA AGTGGAATGT
ATTTATGAAG CGGTAAACGT CAACTCGGCA CGTTGGGTTG AGTGTGATGA TGCTAAGAAA
TTTGAAGAGT TTAAAAACAA GTGTAGAGAT AACTTAGCGA TTGATGGTGG CGGGCATTTG
ACGTATTTGG CACCAACTCG AGTGAATTTG ATGATGGCAG AAGAAAAATG GCCTCAAGTT
CGATTCCACT CAACGCGTGA ACATTGA
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| Protein sequence | MADQNFLNEV SDRRTFAIIS HPDAGKTTIT EKLLLLGQLI QTAGSVKGRK GDKHATSDWM
AMEKQRGISI TSSVMQFPYK DRIVNLLDTP GHEDFSEDTY RTLTAVDSVL MIIDGAKGVE
DRTIKLMDVC RLRDTPILTF INKMDRDIRD PIELLDEVEE VLKIAAAPIT WPIGMSDFFK
GVYNLYTDTI HVFVRGRGHT LMDDIRIEGL QSNEAKELLG DDWESYVDEI ELVRGASHEF
DHDAYLRGEL TPVFFGTALS NFGVREMLDG FVEWAPAPID RETNSRKVEA KEEKFSGFIF
KIQANMDPKH RDRIAFMRVC SGTYSRGMKM RHCRIGKDIK VTDAVSFTAG DREGVEEAFS
GDIIGLHNHG TIQIGDTFTE GEDLKFTGIP HFAPELFRRV RLKDPMKMKA LQKGLQQLSE
EGSTQLFMPQ RNNELIVGAV GQLQYEVVAY RLKDEYKVEC IYEAVNVNSA RWVECDDAKK
FEEFKNKCRD NLAIDGGGHL TYLAPTRVNL MMAEEKWPQV RFHSTREH
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