| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0873 |
|---|
| Symbol | |
|---|
| ID | 5367907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 964241 |
|---|
| End bp | 965383 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640803207 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001339740 |
|---|
| Protein GI | 152994905 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.344098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATTA GTATGTGGAT TAGAGTGTAT GCTATTTTCA TCAAAGAATT AAAGCAGCTC
TCCCGAGACC GAATGACCTT CGGCATGATT ATCATGATAC CGCTGGTACA ACTGATGCTG
TTTGGTTATG CAATTAACAC CGATGCTAGA CACATTCACG TTGGTCTTGT CGACCTCAGT
CAAACATCGG AAAGCCGAGC CGTTGAACAA GCACTGGTAG CCACGCAATC CGTCGACTTT
ATCGCTCGTT ATCGCTCTAT AAAAGAGGCT GAAGTAGCAA TCACTAAAGG TGAAATTAGA
GCCGTATTGT ATTTGCCAGC AGACATGACT CGCCGTTTAT TTAATCACCC GCTCTACGAT
CATAAACAGA CTGACTCCCA ACTTACTCAG CCAATAGGCC AATGGATAGT CGACGGCTCC
GATACCGTCA TTGCGTCTAC CATCAGAGCA TTGCGTAATA TGCCTTTGGA CGAAGTGGCA
AACCATACCG CGACACGCAC CGCACCGAGT TTCGAAGTGG TGCAATACTT CAATCCAGAA
CAAAGAACCG TGGTGAATAT CGTGCCAGGC TTGGTGGCAG TGATACTGAC CATGACAATG
ATTTTATTTA CATCGTCTGC CATCGTTCGC GAGCACGAAC ACGGCAATAT GGAGTTTCTC
ATTACCACGC CAGTGCGTTC GATCGAACTC ATGATAGGAA AAATAGCGCC TTACGTTTTA
GTCGGGCTCT TACAAGTCGC TATTATTTTA TGCGTGGGTC ATTGGATGTT TTCTGTGCCG
ATTAAAGGCA GTTTGCTGTC ACTACTCGGC AGCTCCATTT TATTCATTTT TGCCAGCTTA
ACCCTTGGAT TGGTACTTTC CACCATTGCC AAAACGCAAT TGCAATCGAT GCAGATGACT
ATATTTATTC TCTTGCCATC AATATTACTC TCGGGATTCA TGTTCCCTTA CGATGCCATG
CCGGTCGCTG CCCAATGGAT TGCCGAAGCC CTACCGGTCA CGCACTTCAT GCGCATGATC
CGTGCTATCG TCTTGCGAGA TGCCAGCCTG CTTTTATTAG GAAAAGATGC CTTATGGCTA
GGATTGTTTA CCATAGGCGG AATCATCATT GCCTCGTTAC GCTTCAAGAA GAAACTAGAG
TAA
|
|---|
| Protein sequence | MGISMWIRVY AIFIKELKQL SRDRMTFGMI IMIPLVQLML FGYAINTDAR HIHVGLVDLS
QTSESRAVEQ ALVATQSVDF IARYRSIKEA EVAITKGEIR AVLYLPADMT RRLFNHPLYD
HKQTDSQLTQ PIGQWIVDGS DTVIASTIRA LRNMPLDEVA NHTATRTAPS FEVVQYFNPE
QRTVVNIVPG LVAVILTMTM ILFTSSAIVR EHEHGNMEFL ITTPVRSIEL MIGKIAPYVL
VGLLQVAIIL CVGHWMFSVP IKGSLLSLLG SSILFIFASL TLGLVLSTIA KTQLQSMQMT
IFILLPSILL SGFMFPYDAM PVAAQWIAEA LPVTHFMRMI RAIVLRDASL LLLGKDALWL
GLFTIGGIII ASLRFKKKLE
|
|---|
| |