Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0813 |
Symbol | |
ID | 5368956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 897438 |
End bp | 899417 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640803149 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001339682 |
Protein GI | 152994847 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.32823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA AAAAGTTTGA TTTCCTTTGG TCTCTTCCTC GTTTTTATAA ACGTCTTATC AGCTTAGCGG TTGATTCTGT TTTTGTTTAT CTTGCGTTTG TTTTTGCTTA CTGGGCGCGA TTGGGTGAGT TTAGTGCCTT TAAAGGCCAT TCTATTTGGC TTGTGGTGGC GGGTACTATC GCGGTTACTT TGTTAGTGAA TATAAAGCTT GGTTTATATC GGGCGATTCT GCGTTATTTA ACTTTTCATG CTTTTAGCGC GATTTTAGTT GGTGCGGCTA TTTCTGCATT GAGTATTACG TCTTTTGCGT ATTTCTTTGA GGCGAATATT CCACGTACTG TGCCAATTAT TTATTTTCCT TTTTTGGTTA TGTTGTGTGG TGGTTCTCGG GTTTTGATAC GTGGCTTATT GACTCAGGCT CCACAAAAAG GATCTGAATC TGTATTGGTT TTTGGTGCTG GATCTACTGG TAGGCAGTTG ACTTTGGCGC TTCGTCAGGC TTCTAGTTAT CGCGTGAAGG GTTTTATCGA TCGTGATGAG TCTTTAGCCA ATACCATTAT TCAGGGTGTG CCTGTTTATA ATGTCGATAA AATTGGTGAA TTAATCGAAA AATACGACAT TGAAAAGGTG TTGTTAGCTA TTCCTAAGGC GAGTCGTTCT GAACGGAAGC AAGTGATCGA ACAACTCATG CCTTATCCGG TGGAAGTGCT TACCGTGCCA GACTTTAATG ACATAGTAAC AGGTAAGGCT AAGGTAAGTG AGCTACAAGA CGTTGCTGTC GATGATTTGC TAGGTCGGGA TGTGGTAGAA CCTGTTGCCT CGTTAATGCA GGCGAATATC TCTGGCAAAG TGGTCATGGT TACAGGGGCT GGCGGTTCGA TAGGCTCGGA GTTATGTCGT CAGATTATAG CGCAGCAGCC TAGTACCTTG ATTGTATTTG ATGTGTCTGA ATATGCCGTG TATCAGATAG ATAAAGAGCT TAATGAGATT CTTGAGCAAG AGTCTTTTAA TATCAAAATT GTGCCTTTGA TTGGCTCTGT GCAGCGTATT AATCGCTTAG CTTCTACCAT GAAGGCATTT GGGGTTAATA CTGTTTACCA CGCGGCGGCT TATAAACACG TGCCATTGGT TGAATACAAT GTAGTTGAAG GCGTACGAAA CAATGCTTTT GGGACTTATT ATTCCGCTAA AGCGGCGATT GAAAGTGGTG TGGAATCCTT CGTATTAATC TCTACAGATA AAGCTGTTCG ACCAACTAAT GTGATGGGCG CAACAAAACG TATGGCGGAG CTGGGGTTGC AAGCCTTGGC CGAAGCTGAA GCGAAGAAAG CCGCTAAACA AGAAAAATTT ACCCGTTTCT GTATGGTGCG TTTTGGTAAT GTGCTTGGCT CTTCTGGCTC GGTTATTCCT GTCTTTAAAA AGCAAATTCT GGAAAACCAG CCTATTACGG TGACACACCC AGATATTATT CGTTACTTCA TGACCATTCC AGAAGCTGCT CAGTTGGTGA TTCAAGCAGG CGCTATGGGT AAGGGTGGGG ATGTGTTTGT ATTGGATATG GGGGAACCCG TTAAGATTGT TGATCTGGCG AAGAATCTGA TTCGTTTGTC TGGTTTGGAA GTGAAGTCCG ATGCTAACCC AAATGGCGAT ATTGAAATTC AATTTACCGG GCTGCGTCCT GGCGAGAAGC TTTTTGAAGA GTTATTGATT GGCGATAATG TAAAAGAAAC CCAGCATAAA CGTATTATGA CGGCTAATGA ACGGTTTTTA TCCTTGCCTG ATTTTGTTCA AACCATGGAG CAATTGGACA AAGCTTGCCA TGATTTTGAC CATGAAAAAG TGCGTGAGAT CTTGATTACG GCTCCAACCG ATTTCCAGCC AACCGATGGT ATTGGCGATT TGGTGTGGAA TGCGAAAAAG GCGTTAGATC AGCAAGTTGA AGATTCAAAT GTTGTTCACT TGAAAGAGCA TGTATCGTAG
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Protein sequence | MMIKKFDFLW SLPRFYKRLI SLAVDSVFVY LAFVFAYWAR LGEFSAFKGH SIWLVVAGTI AVTLLVNIKL GLYRAILRYL TFHAFSAILV GAAISALSIT SFAYFFEANI PRTVPIIYFP FLVMLCGGSR VLIRGLLTQA PQKGSESVLV FGAGSTGRQL TLALRQASSY RVKGFIDRDE SLANTIIQGV PVYNVDKIGE LIEKYDIEKV LLAIPKASRS ERKQVIEQLM PYPVEVLTVP DFNDIVTGKA KVSELQDVAV DDLLGRDVVE PVASLMQANI SGKVVMVTGA GGSIGSELCR QIIAQQPSTL IVFDVSEYAV YQIDKELNEI LEQESFNIKI VPLIGSVQRI NRLASTMKAF GVNTVYHAAA YKHVPLVEYN VVEGVRNNAF GTYYSAKAAI ESGVESFVLI STDKAVRPTN VMGATKRMAE LGLQALAEAE AKKAAKQEKF TRFCMVRFGN VLGSSGSVIP VFKKQILENQ PITVTHPDII RYFMTIPEAA QLVIQAGAMG KGGDVFVLDM GEPVKIVDLA KNLIRLSGLE VKSDANPNGD IEIQFTGLRP GEKLFEELLI GDNVKETQHK RIMTANERFL SLPDFVQTME QLDKACHDFD HEKVREILIT APTDFQPTDG IGDLVWNAKK ALDQQVEDSN VVHLKEHVS
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