Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0640 |
Symbol | |
ID | 5364848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 698688 |
End bp | 699611 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640802976 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_001339509 |
Protein GI | 152994674 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0425739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGG CTTACATCAC ACACACTTAT TGCGACAAGC ATGATATGGG AGAAGATCAT CCTGAGTCTC CATTGCGCCT TGGTGCGATT CAAAATCGTT TGATCATGGG GCAGTTGATG GATTTTCTAC GTCGTTTAGA GTCCGATCCA GCAACGCGAG AGCAATTGCT GCTGGCTCAT GATGAAGCCT ATGTGGACTC TATTTTTGCG CGAGCGCCGG AAGAAGGTCA TGTGGAACTA GAACCAGAAA CCTTGATGAT GCCACACACG CTAGATGCTG CGCTCTATGC AGCAGGTTCG GTGATTAAAG CAGTAGACTT AGTAATGACT AGCGAAATGG ACAACGCCTT TTGCGCGATT CGCCCACCGG GTCATCATGC AGAGTACGAC AAAGCTATGG GCTTTTGTTT GTTCAATAAC ATTGCTGTTG GAACACGTTA TGCCATTGAA AAATACGGTT TAGAGCGTGT GGCGATCGTA GATTTTGATG TTCATCACGG TAACGGTACC GAAGACATTT TTAAAGCTGA TCCGAAAGTG CTTTATGCTT CCAGCTACCA ACATCCGTTT TATCCCTACA GCGATCCAGG TGCTTCTCAC GATAATATTT TACATATGCC TTTGGAAGCA GGCTCTGGCA GTGAAGCTTT TCAAACTATC ATGACTGAGC AGCTGTTGCC AGCGCTGGAC ACATTCAAGC CGCAGCTGAT TATGATTTCA GCAGGCTTCG ACGCTCACAA AGAAGACCCA ATGGGGCAAC TAAGATTAAG CGAATCTGAC TTTACTTGGA TTACCGATCT TCTGATGGAT GTTGCTGATC GTCATTGTAG TGGAAACGTA GTATCGGTGT TAGAAGGTGG TTATAACGTA GATGCGTTGG GGCGCGCTGC ATTTTGTCAT ATCAAAAGCT TAATGAAGCT TTGA
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Protein sequence | MTTAYITHTY CDKHDMGEDH PESPLRLGAI QNRLIMGQLM DFLRRLESDP ATREQLLLAH DEAYVDSIFA RAPEEGHVEL EPETLMMPHT LDAALYAAGS VIKAVDLVMT SEMDNAFCAI RPPGHHAEYD KAMGFCLFNN IAVGTRYAIE KYGLERVAIV DFDVHHGNGT EDIFKADPKV LYASSYQHPF YPYSDPGASH DNILHMPLEA GSGSEAFQTI MTEQLLPALD TFKPQLIMIS AGFDAHKEDP MGQLRLSESD FTWITDLLMD VADRHCSGNV VSVLEGGYNV DALGRAAFCH IKSLMKL
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