| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0389 |
|---|
| Symbol | |
|---|
| ID | 5366670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 448186 |
|---|
| End bp | 449112 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640802727 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001339262 |
|---|
| Protein GI | 152994427 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.813465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.450006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATC CTCTTTCAAG TATTGTGACC CTATTGCAAC CAAAGGCCGC TTTTTCTAAG
GTAGTCCATG CTGCAGGCAA GTGGCGCATT AGACGCGAAG AAATCGGTAA CCCGTTCTAT
TGTGTTGTGC TAGAGGGAAG TTGCGAGTTC ACATTAAAAG GCGATGAACC GATTTATTTA
ACCGCTGGCG ATTTTGTCCT TGTTCCTGAA GCTCATGCTT TTACGGTAGC CAGCAGCCAT
CCTCCAGCAC TGACCGACGC CGATACTGTG CCTATTAAAA CGGCAGCTAG CACTTATTTT
GCAGGTGAAG CAGAGCAAGA GTTGAATGCG CATTTACTTA TTGGCCATTG CCAATTTGAG
GCACCTGATT CAAAAATACT GATATCGCTT CTTCCTAAAC TTGTTCACCT CCGCGAAGCG
AAAAGGCTCG CCACGCTGGT CGAGCTTGTT ATTGAGGAAT CTTTGGCGCA ACGCCCCGGC
CGTGATTCTG TATTGGCTCG ATTATTAGAG ATTCTGCTGA TTGAAGCTTT TAGAACGAAG
ATGGACACAC CAGAAGTTCC TGGTTTGTTA GTCGGTTTAG CCGATGAGCG ACTTGCCATG
GCAATTCGAA AAATTCATCA AGATGTGAGT AAAGCATGGA CGATTGATCA ATTAGCCAAA
GAAGCCTCAT TGTCTCGTTC CAGCTTTTTT CAACGTTTTA GTAAAGCCGT GGGTTATACA
CCAATGGAAT ATGTTATTGC ATGGCGTATG GCGATTGCGA AAGATCTCTT AAGGCGCCAA
ACGTTTACTA TGGCCACCAT TGCAGAAAGG ATAGGTTACC AATCTGCCAG TGCGTTTAGC
TCTGCTTTTA GTAAATATAC AGGGCAAGCT CCGTCAAAAT TTTTGCTTGA AGACGCTCTT
GTTGATAGAG AGTCGCGGGA AGTTTAA
|
|---|
| Protein sequence | MIDPLSSIVT LLQPKAAFSK VVHAAGKWRI RREEIGNPFY CVVLEGSCEF TLKGDEPIYL
TAGDFVLVPE AHAFTVASSH PPALTDADTV PIKTAASTYF AGEAEQELNA HLLIGHCQFE
APDSKILISL LPKLVHLREA KRLATLVELV IEESLAQRPG RDSVLARLLE ILLIEAFRTK
MDTPEVPGLL VGLADERLAM AIRKIHQDVS KAWTIDQLAK EASLSRSSFF QRFSKAVGYT
PMEYVIAWRM AIAKDLLRRQ TFTMATIAER IGYQSASAFS SAFSKYTGQA PSKFLLEDAL
VDRESREV
|
|---|
| |