Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0358 |
Symbol | |
ID | 5368730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 416986 |
End bp | 418146 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640802696 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001339231 |
Protein GI | 152994396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00342329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTAA GAGTTCTTAT TTGCCTAACT CTGTCGCTTT TTTTATTGGG TGAAAAAGCC TATTCATCCG AGTTACGTTT TGGTTTTACT GGCCCGTTGA CAGGTCCAAA TGCCTTTACG GGAACTCAGG TGGTTCGCGG CATTGAGTTA GGCTTTAAAC GTATCAATGA CAGCAAGAAA CTCAACTATC AACTTTTATT AGTTCCCTTA GACGACGGCT ATGAGCCAAG TCGAACACCT TCCCAAGTCT CTACTCTGAT CAATGATTAT GGGATAAAAG CCATATTGGG CAGCGTTGGA ACACCAACAA ACCTTGCCTC TCTTAGTATT TTATCAAAAC ACAAGATACC GCTTATATCA CCTTTCACTG GGGCACAATC TATTCGCGCC GAAAGGTCGT CACCCTTCAT TTTTAATACT AGGGCAAGCT ACACCGAAGA AGCCCATTTT TTAATCAACA TTCTGGTAAA TGATTTAGGT ATAAAGCCGA ATGAGATTGC GATTTTTGCA CAGAAGGACA GCTACGGTGA TGCAGGATTA GCCAGCACAA TAGAAGCTTT AACGGGCGCT GGATTAAAAA ATCCCGCATC AATATTACAG ATTCGGCATC AGCGAAATAG TAGCGAAATA AGCCATTCTG TTGCCGATGT ATTGGGTGTT TTTCCGATAC CAAAAGTCAT TATTATGATC AGTACTTATG ACACAAGCAC CAACTTTATT AAGCAGCTTG AGGTCTTTGA CATCTCACCA CTGTTTGCTG CCTTTTCATT TACTGGGCTT GAGGCCTTAC AAGCGCAAAT TAGCGACACT AAGGCAAAAA TGCTAATAAC TCAAACAACC CCTTCGCTAA ATAACTCGAA ATCACCAATC ATCAAACAAC TGAAAGAAGA CATGGCACGC TTTGGCGACC TAGCTCCTCC AACGACAATG CAACTGGAAG GTTACATCAA TGCTCTCATT GTTGGACAAG CTCTTTTGCC ATTAAAAGAC GTTCCTACAA GCAAAGAAAT TGAAGACAGC TTAAAAAAAC TCGCGAAGGA TAATTATGAC TCTCAGGAAC AAAACGAACT GTATGTTTTA AACATCAAAA AACGACATAT TTGGGTACAG CTTATTATCA ATGGCGCATT ACAAGAATTC TCTTACGCTG ATATGCAGTA A
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Protein sequence | MILRVLICLT LSLFLLGEKA YSSELRFGFT GPLTGPNAFT GTQVVRGIEL GFKRINDSKK LNYQLLLVPL DDGYEPSRTP SQVSTLINDY GIKAILGSVG TPTNLASLSI LSKHKIPLIS PFTGAQSIRA ERSSPFIFNT RASYTEEAHF LINILVNDLG IKPNEIAIFA QKDSYGDAGL ASTIEALTGA GLKNPASILQ IRHQRNSSEI SHSVADVLGV FPIPKVIIMI STYDTSTNFI KQLEVFDISP LFAAFSFTGL EALQAQISDT KAKMLITQTT PSLNNSKSPI IKQLKEDMAR FGDLAPPTTM QLEGYINALI VGQALLPLKD VPTSKEIEDS LKKLAKDNYD SQEQNELYVL NIKKRHIWVQ LIINGALQEF SYADMQ
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