Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0151 |
Symbol | |
ID | 5369211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 176705 |
End bp | 178063 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640802493 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001339028 |
Protein GI | 152994193 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0196891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000113138 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGATT TGAATGTGAA AAACCAACCT GTTTTAAAGC AATTTGTCCC GACTCCACCT CGTCCGCCAC ATAAAAGTGA AAGAGGTATT CTCGGCACAA TTCGTCATCG TTGTTTTAAC AGTATTGGCA ACAGCTTGCT GACCTTGTGT GTGGCGACTG TGCTGTTTTA TCTAGTGAAA CATGTGTTGG ATTGGGCGGT GTTTAATGCG GTTTTCATCG CGGATAATCG TCGTCAATGT ATGGATATCA GTCCAGACGG CGCCTGTTGG GCCGGTGTTA TTAGCTGGTT TAATGGCTTA ATTTACGGGC GTTTTCCGGT GGACGAGCAA TGGCGCGTCA ATATCGGCGT CTTGCTCGGA TTGGTTTGGT TATTGCCGTT GATGTCGAAG CGTATTCCAT TACGTAATTT TATATTGTTG TCTTGGATTG GCTTGTATCC TTTTGTGGGC GGTTATCTTT TCTTAGGCGG CCGTTTTGGC GAGGAATTAG GCTTGGTACA TGGTGCGATG ACCTGTCTTG CCTTGGCTTT CTTAGCCATT ATCTACGCAA ACTGGATCTT GTCGGCGCTG GGGAAGAAAG GCTTAAACGA ACTTTTTGTG CCGCTGGTAT CACGCTTGGT TGAGCGCCGT ATTCATCTGT TGGGCTTTGT TGCTGTTTGG CTGCTTGTCG CATTGGTGAT CGCGTCTGGG CTTAGCCAAG TGTCATTGGA GCCTGTGCCA ATTGAGCGTT GGGGCGGTTT GTTCCTAACC TTCATCATTG CTGGCTTTGC CATCACCATG GCGATTCCTG TGGGCGTGAT TTTAGCGCTA GGTCGACGTT CTAAATTGCC AGTGATTCAT TGGTTGTCGA TGACAGTGAT CGAGTTAGTT CGTTCTGTAC CTTTGATCAC TGTCTTATTT ATGGCGGTGA CCTTGCTGCC TATCTTTTTG CCAGCGGATA TGGAGTTTAA CAAGCTCACG CAAGTACTGG TCGCAGTGTG TTTGTTTGCT GGTGCTTACA TGGCCGAAAA CATTCGTGGT GGTTTGCAGG CGATCCCAAA AGGTCAGTAC GAAGCCGCGG CTACGCTTGG TTTAGGGTAT TTGCACACCA TGGTGCTGAT CATTCTGCCC CAGGCCCTAA GGATGATGAT TCCGAATATC ATGACGTCGT TTATCAGCTT GCTGAAAGAC ACCACATTGG TTTCTATCAT CGGCTTGTTC GACATCATGT TGATGGCGCG CAACATTGCC AACGACAAAG ACTGGGTGGG AATGCACACT GAGCCATTGG TGATGATTTC CGTGCTCTTC TTTATCTTGT GCTACAGCAT GTCTCAATAC AGTTTGAATC TTGAAAAACG TTTAAAGGTG GATCGCTAA
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Protein sequence | MDDLNVKNQP VLKQFVPTPP RPPHKSERGI LGTIRHRCFN SIGNSLLTLC VATVLFYLVK HVLDWAVFNA VFIADNRRQC MDISPDGACW AGVISWFNGL IYGRFPVDEQ WRVNIGVLLG LVWLLPLMSK RIPLRNFILL SWIGLYPFVG GYLFLGGRFG EELGLVHGAM TCLALAFLAI IYANWILSAL GKKGLNELFV PLVSRLVERR IHLLGFVAVW LLVALVIASG LSQVSLEPVP IERWGGLFLT FIIAGFAITM AIPVGVILAL GRRSKLPVIH WLSMTVIELV RSVPLITVLF MAVTLLPIFL PADMEFNKLT QVLVAVCLFA GAYMAENIRG GLQAIPKGQY EAAATLGLGY LHTMVLIILP QALRMMIPNI MTSFISLLKD TTLVSIIGLF DIMLMARNIA NDKDWVGMHT EPLVMISVLF FILCYSMSQY SLNLEKRLKV DR
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