| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0097 |
|---|
| Symbol | |
|---|
| ID | 5364696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 108005 |
|---|
| End bp | 109069 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640802439 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001338974 |
|---|
| Protein GI | 152994139 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC AAGAAAACAA TCCATCCTTG CCGAAGCAAG TAGAAAAGCG TACGACTCGC
CGCGTTTTAT TAGTGGCATT GCCTCTAGTG GTGATTTTAG CTTCTGTGTT TGTGTATATG
AAAGGCGGTC GTTATGTTGA AACAGATAAC GCTTATGTCC AATCAGATAT AACGACAATC
AATGCTGAAG TGTCTGGTGC GATTCAAACG ATAGCGATCA AAGAAAACGA AAAAGTCTCA
AAAGGTCAGT TGTTATTCAG CATTGATGCA ACGCCTTTCA AAGTGGCTGA AGCGAAGGCC
CAAGCGCAGT TGCAACAAGT TCGATTAAAT ATCTTGGAGC AAAAAGCGGC TTACGAAGAG
AAAAAGGCTG AAATCAATCA AGCGGAGAAC GAGTTTGCCT TTAATCAACG TGAAGAAAAG
CGTCAGGCAA ACCTGCTAAA ACAAAAATTT ATTTCAGACA CTCAGTTTGA TCAAGCTAGA
CAGGCGGCCG AAGTCAGTGA ACTAAAGGTT GCTACCTTGA AGAAAGACTT GTTTCGATTG
AAAGAAGCTT TGGGCGGAGA TCCAAGCGCA CCTCTTGAAG ATCACCCTAG TTACCAAGCC
GCTCAAGCTG CCTTAGATCA AACTCGTATT GATCTTGGTC ACGTAAATGT GAGAGCGCCA
GCGTCTGGTG TGGTAGCAAA AGTTCCTAAT AGCGGTGAAT ACGTAACGGC AGGTTCCACT
ACTATGGTGT TGGTATCTGA TGAGCGACAA TGGATTGCAG CAAACTTTAC TGAGAAAGAT
TTAACCTATG TTCAACCAGG CCAAGAAGTT GAAATAGAAG TGGACGCTTA CCCTGGAGTT
TCACTACATG GCAAGGTTGA AAGTATTAGT CCTGCGACGG GCTCTGAATT TTCAGTGATT
CCAGCGGAAA ATGCGACAGG CAACTGGGTA AAAGTTGCCC AGCGCCTTTC TGTGAAGATT
CTTGTCGATA CAGATCAAGA TACACCAGTA TTACGTACAG GCTTTAGTTC AAATGTCACA
ATAGATACAG AACATCAGCG CCGTTTATTC GGTCTAGCTT TGTGA
|
|---|
| Protein sequence | MSEQENNPSL PKQVEKRTTR RVLLVALPLV VILASVFVYM KGGRYVETDN AYVQSDITTI
NAEVSGAIQT IAIKENEKVS KGQLLFSIDA TPFKVAEAKA QAQLQQVRLN ILEQKAAYEE
KKAEINQAEN EFAFNQREEK RQANLLKQKF ISDTQFDQAR QAAEVSELKV ATLKKDLFRL
KEALGGDPSA PLEDHPSYQA AQAALDQTRI DLGHVNVRAP ASGVVAKVPN SGEYVTAGST
TMVLVSDERQ WIAANFTEKD LTYVQPGQEV EIEVDAYPGV SLHGKVESIS PATGSEFSVI
PAENATGNWV KVAQRLSVKI LVDTDQDTPV LRTGFSSNVT IDTEHQRRLF GLAL
|
|---|
| |