Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0043 |
Symbol | |
ID | 5368129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 48273 |
End bp | 49229 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640802386 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001338921 |
Protein GI | 152994086 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC CAATGTTAAA AGTCGCTGTG ATGTCATCAA TCTTATTGGC CGGTCTATCT CAGGCTGCCG ATGTTACGTT GAAATTTGGC TATCCAGCCA ATGAAGACAA TATTTGGCAT AAAGCTGCTT TGAAATTTAA AGAAGTGGCA GAAACAAAAT CGAATGGTCG TATCGACGTT AAGCTTTATC CTAACGAACA GCTGGGAAAA GAAATGGATG TTATTAATAG CATTCAGCTT GGTACAGCAG ACATGACTAT TACGGGTGAA TCATTGCAAA ACTGGGCACC AAAAGCTGCG CTGATGGCGG TTCCTTATGC TTTTACCAGC TCTGAACAGC TCAAAAAGGC TGTTGATGGT GAGGTTGGTA AAGAAATTAG TGAGCAAATT TCTGAGCGCA CTGGGCTTAA ACCCATTGCG TGGTTCGAAC GTGGACCACG CCATCTAACA TCTAACCGTA AGATTTTATC TCCAAGCGAT TTAGATGGTT TGAAATTACG AGTGCCTAAT GTCCCTTTAT TTGTAAAAAC TTGGCAATCT CTAGGTGCCA AACCCATTCC AATGGCGTTT AGCGAAGTAT TTACTGCCTT GCAGCAGAAT ACGATTGATG GGCAAGAGAA CCCACTAAGT TTGATCAATA GTGCGAGTTT CTACGAAGTT CAGAAATATG TGAACTTAAC AGGTCACGTT CGTAGCTGGA TTTATGTGGT GATTGGCCAA GACAAGCTAA ACAGTATGCC TGCCGATTTG CGAGACATCG TTCTGGACGC TGGTAAGCAA ATGCAAAGCT ATGAACACAG CATGTTTGCT GCAGATGAAG CACAATTGCG TTCTACTCTA GAAGCTCGTG GGATGGAATT TGTACAGCCA GATCTTGAAG CGTTCAAAGA GGCGGCTCAA AAGGCAGTAC AAGAAGCACT TACTCCTGAG CAGCTTGCAC TTTATAAAAA GATCTAA
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Protein sequence | MIKPMLKVAV MSSILLAGLS QAADVTLKFG YPANEDNIWH KAALKFKEVA ETKSNGRIDV KLYPNEQLGK EMDVINSIQL GTADMTITGE SLQNWAPKAA LMAVPYAFTS SEQLKKAVDG EVGKEISEQI SERTGLKPIA WFERGPRHLT SNRKILSPSD LDGLKLRVPN VPLFVKTWQS LGAKPIPMAF SEVFTALQQN TIDGQENPLS LINSASFYEV QKYVNLTGHV RSWIYVVIGQ DKLNSMPADL RDIVLDAGKQ MQSYEHSMFA ADEAQLRSTL EARGMEFVQP DLEAFKEAAQ KAVQEALTPE QLALYKKI
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