Gene Mmwyl1_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0043 
Symbol 
ID5368129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp48273 
End bp49229 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID640802386 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001338921 
Protein GI152994086 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC CAATGTTAAA AGTCGCTGTG ATGTCATCAA TCTTATTGGC CGGTCTATCT 
CAGGCTGCCG ATGTTACGTT GAAATTTGGC TATCCAGCCA ATGAAGACAA TATTTGGCAT
AAAGCTGCTT TGAAATTTAA AGAAGTGGCA GAAACAAAAT CGAATGGTCG TATCGACGTT
AAGCTTTATC CTAACGAACA GCTGGGAAAA GAAATGGATG TTATTAATAG CATTCAGCTT
GGTACAGCAG ACATGACTAT TACGGGTGAA TCATTGCAAA ACTGGGCACC AAAAGCTGCG
CTGATGGCGG TTCCTTATGC TTTTACCAGC TCTGAACAGC TCAAAAAGGC TGTTGATGGT
GAGGTTGGTA AAGAAATTAG TGAGCAAATT TCTGAGCGCA CTGGGCTTAA ACCCATTGCG
TGGTTCGAAC GTGGACCACG CCATCTAACA TCTAACCGTA AGATTTTATC TCCAAGCGAT
TTAGATGGTT TGAAATTACG AGTGCCTAAT GTCCCTTTAT TTGTAAAAAC TTGGCAATCT
CTAGGTGCCA AACCCATTCC AATGGCGTTT AGCGAAGTAT TTACTGCCTT GCAGCAGAAT
ACGATTGATG GGCAAGAGAA CCCACTAAGT TTGATCAATA GTGCGAGTTT CTACGAAGTT
CAGAAATATG TGAACTTAAC AGGTCACGTT CGTAGCTGGA TTTATGTGGT GATTGGCCAA
GACAAGCTAA ACAGTATGCC TGCCGATTTG CGAGACATCG TTCTGGACGC TGGTAAGCAA
ATGCAAAGCT ATGAACACAG CATGTTTGCT GCAGATGAAG CACAATTGCG TTCTACTCTA
GAAGCTCGTG GGATGGAATT TGTACAGCCA GATCTTGAAG CGTTCAAAGA GGCGGCTCAA
AAGGCAGTAC AAGAAGCACT TACTCCTGAG CAGCTTGCAC TTTATAAAAA GATCTAA
 
Protein sequence
MIKPMLKVAV MSSILLAGLS QAADVTLKFG YPANEDNIWH KAALKFKEVA ETKSNGRIDV 
KLYPNEQLGK EMDVINSIQL GTADMTITGE SLQNWAPKAA LMAVPYAFTS SEQLKKAVDG
EVGKEISEQI SERTGLKPIA WFERGPRHLT SNRKILSPSD LDGLKLRVPN VPLFVKTWQS
LGAKPIPMAF SEVFTALQQN TIDGQENPLS LINSASFYEV QKYVNLTGHV RSWIYVVIGQ
DKLNSMPADL RDIVLDAGKQ MQSYEHSMFA ADEAQLRSTL EARGMEFVQP DLEAFKEAAQ
KAVQEALTPE QLALYKKI